Gene Information

Name : Sph21_2065 (Sph21_2065)
Accession : YP_004317294.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 2534544 - 2535299 bp
Length : 756 bp
Strand : -
Note : PFAM: Bacterial sugar transferase; KEGG: chu:CHU_1927 sugar transferase

DNA sequence :
ATGTTAAGAGATTCGCAAATACAAGAAATGAAGCAGGCTACCAGTGTAGATCAAAGCATTGTTGTGCCTAATGTGATGCT
AAGAACATCGTTTACCAGTTTAATTGAAAACAATTTTTTGCACTATGCAGACTTCCCTATCATTCTTATTAATAAAGGTG
AAGCGCTCGATATAACGTCTAAATTTTTCAAAAGAAGCTTTGATATCGTATTTTCTCTAGTGGCTTTGATTCTTGGCTTT
CCCCTATTTTTATTAGTTGCCATTATTACCAAGCTAAGCTCAAAAGGGCCCGTTTTTTACAAACAAGAACGTATCGGCTT
ACATGAGAAACCATTTTTCATCTATAAGTTTAGAAGCATGTATATTGATGCGGAGAAGTTTGGTCCGCAGTTAGCTCAGG
ATGTAGATCCACGTATCACACCATGGGGAAGGCTGATGCGTAAAACGCGCCTTGACGAAATTCCGCAATTTTGGAATGTG
TTAAAAGGTGATATGTCAATTGTTGGTCCTCGTCCGGAAAGAGCACATTTTATTAAGCAAATTGTAGATAAAGCCCCGAG
CTATAAAAAATTATTGACTATCAAACCAGGTATTACTTCTATTGGACAGGTTAATTTTGGATATGCGCAAACGGTTGATG
AAATGTGTGAGCGGATGTTATTAGACTTGCAATATTTACAAGGAATTAACTTCTTTGCCGACCTCCAAATAATTTTTAAG
ACGGTAAAGGTCATGTTTCAAGGAAAAGGTAAATAG

Protein sequence :
MLRDSQIQEMKQATSVDQSIVVPNVMLRTSFTSLIENNFLHYADFPIILINKGEALDITSKFFKRSFDIVFSLVALILGF
PLFLLVAIITKLSSKGPVFYKQERIGLHEKPFFIYKFRSMYIDAEKFGPQLAQDVDPRITPWGRLMRKTRLDEIPQFWNV
LKGDMSIVGPRPERAHFIKQIVDKAPSYKKLLTIKPGITSIGQVNFGYAQTVDEMCERMLLDLQYLQGINFFADLQIIFK
TVKVMFQGKGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 9e-22 42
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-22 41