Gene Information

Name : Sph21_1533 (Sph21_1533)
Accession : YP_004316765.1
Strain : Sphingobacterium sp. 21
Genome accession: NC_015277
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : -
Position : 1887052 - 1888548 bp
Length : 1497 bp
Strand : -
Note : KEGG: cpi:Cpin_5844 catalase; PFAM: catalase-related subgroup; catalase-related immune responsive

DNA sequence :
ATGGAAGAGAAAAAGAAGTTAACAACCGCCTCGGGTATTCCCGTCACTAACAATGAAGACTCGATGACCGTTGGGCCACG
CGGCCCTATATTATTGCAGGATTTTCACCTGCATGAAAAAATGGCCCATTTTAATCGCGAACGAATTCCCGAACGCGTGG
TGCACGCTAAAGGTTCGGGTGCTTATGGCACATTTACCGTAACCCAGGACATCACCTCCTACACAAAAGCTAAAATTTTT
AATGAGATAGGCAAAAAAACGCGTTTGTTTTTACGCTTTTCAACGGTTGGAGGGGAAAAAGGTTCAGCTGATACAGAAAG
AGATCCACGCGGCTTTGCCGTTAAGTTCTATACGGAAGACGGCAATTGGGATCTCGTCGGCAATAATACACCGGTTTTCT
TTGTAAAAGATCCAAAAAAATTCAGCGACTTTATCCATACACAGAAGCGTGATCCGCAAACCAATATGAAAAGCGCAACG
ATGTTGTGGGATTTCTGGTCGTTAAACCCGGAGAGTCTGCATCAGGTGCTTATACTGATGTCAGACCGGGGCACACCTGT
AGGATATCGTCACATGCACGGTTTTAGCAGTCACACATTCTCTTTCATCAATAGCAATAATGAGCGTGTATGGACCAAGT
TCCATTTCAAAACGGAACAGGGCATTAAAAATTTCACCAATGACGAAGCGATGCGCATGCGGGGAGAAGACCCTGATTTT
GCACAGCGTGATTTATTTGAAGCGATTGAACGCGGCGATTTCCCTCGCTGGAAACTATATATACAGATAATGACGGAGGA
ACAGGCGAAGGCCTTTCGCTGGAATCCCTTTGACTTAACCAAAATTTGGCCTCAGAGAGAGTATCCTTTACAAGAAGTGG
GCGTTTTAGAACTGAATGAAAATCCATCCAATTATTTTGCCGAAGTAGAACAGGCGGCCTTCGCACCGGCACATGTTATT
GACGGTATTAGCTATTCGCCCGACAAGATGTTGCAGGGGCGGATTTTGTCTTATCCGGATGCCCATCGTTATCGATTAGG
TGTAAATTATGAGCAAATTCCGGTAAACAGGTGCCCTTTTATGGTAGCCAATTATCAACGGGATGGCTATATGCGCGTAG
ACGGAAATGGAGGCTCCACGCCAAACTATTTCCCCAACAGCTTTGATAGCATCTATGAAGATGAAAGCTACAAACAGCCT
GCATGGAATTTAGAAAGCGATATTGCCGATTGGTATAACCGCAACGCGCCGGGCGAGGATGATCACTATACGCAACCTGG
AAATCTTTTCAGATTGATGACACCGGAAGCCAAACAAAACACCATTCATAATATCGTGACCTCAATGAAGGGTATCACCG
GCTCCAAGAAGGAGCTCATTATTAACCGACAGCTGTGTCACTGGTTTAGAGCCGATGTGCAGCTCGGCATGGCCATTGCG
CAGGGATTGGGGCTAAATATGGAATCACTCAGTCAACATATGCCACAGGCTCAATAA

Protein sequence :
MEEKKKLTTASGIPVTNNEDSMTVGPRGPILLQDFHLHEKMAHFNRERIPERVVHAKGSGAYGTFTVTQDITSYTKAKIF
NEIGKKTRLFLRFSTVGGEKGSADTERDPRGFAVKFYTEDGNWDLVGNNTPVFFVKDPKKFSDFIHTQKRDPQTNMKSAT
MLWDFWSLNPESLHQVLILMSDRGTPVGYRHMHGFSSHTFSFINSNNERVWTKFHFKTEQGIKNFTNDEAMRMRGEDPDF
AQRDLFEAIERGDFPRWKLYIQIMTEEQAKAFRWNPFDLTKIWPQREYPLQEVGVLELNENPSNYFAEVEQAAFAPAHVI
DGISYSPDKMLQGRILSYPDAHRYRLGVNYEQIPVNRCPFMVANYQRDGYMRVDGNGGSTPNYFPNSFDSIYEDESYKQP
AWNLESDIADWYNRNAPGEDDHYTQPGNLFRLMTPEAKQNTIHNIVTSMKGITGSKKELIINRQLCHWFRADVQLGMAIA
QGLGLNMESLSQHMPQAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 6e-132 59
katA YP_005126717.1 catalase Not tested Not named Protein 6e-102 46
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 9e-96 45
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 9e-96 45
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 9e-96 45
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 9e-96 45