Gene Information

Name : Marme_0963 (Marme_0963)
Accession : YP_004312074.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 1085905 - 1086735 bp
Length : 831 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: cyp:PCC8801_3037 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGTTGGCAGTCGAGCGTTTAAACGCTGGTTATAAGAAAAAGCAGGTTTTACATAACATAGATCTTACCTTTTCAACAGG
TAAGTTTACTACCTTGATGGGCGCAAACGGCTGTGGTAAGACAACCTTGCTGCATGCTATTTCTGGGTTGATTACTCCGT
TAAATGGAAGCATTGCTTTGAATGATGAGGTGCTTTCTACATTGAGTCGAAAGCAGATCGCCAAGCGTTTAGCACTGTTG
CCTCAATTCGCTACCAACCCCGCTGGCCTAACCGCTCGTGAACTGATTATGCAGGGACGCTTCCCTTGGCAGAGCTGGTG
GAAGCAGTGGTCCGATGCTGATGAGAACGCGGTATCGGATGCGGTGCGCGTCACGGGCGTAAATGACTACCTTGATACAC
CACTTGAACAACTGTCTGGTGGGCAAAGGCAGCGTTGCTGGATTGCGATGACACTTGCCCAAGATACGCCTGTTTTGCTG
TTGGATGAGCCTACAACGTATTTGGATGTGGCGCATCAGGTTGAGTTAATGAACCTAATTTCTTCTTTGAAACACCAAGG
TAAAACCATTATTGCCGTTTTGCACGATCTTAATCAGGCGGCAACCTACTCAGATCACCTTGTAATGATGAAACAAGGTC
AGGTGTTTACAGAAGGTGCTGTTGATGCGGTTTTTACAAAAGAAAATCTGGAAGCCGTTTTTGGGTTAAACGCTCATATT
ATTCGTGATCCACATAACGGTAACCCGATTGCGCTGCCCGTGGTCGATATGTCTGGTGATGGGCGCATCGTAAAGAATGA
CGAACTGAACCGAATAGAGAGTGTGAGTTAA

Protein sequence : 
MLAVERLNAGYKKKQVLHNIDLTFSTGKFTTLMGANGCGKTTLLHAISGLITPLNGSIALNDEVLSTLSRKQIAKRLALL
PQFATNPAGLTARELIMQGRFPWQSWWKQWSDADENAVSDAVRVTGVNDYLDTPLEQLSGGQRQRCWIAMTLAQDTPVLL
LDEPTTYLDVAHQVELMNLISSLKHQGKTIIAVLHDLNQAATYSDHLVMMKQGQVFTEGAVDAVFTKENLEAVFGLNAHI
IRDPHNGNPIALPVVDMSGDGRIVKNDELNRIESVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-57 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-54 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-52 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-52 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-52 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-52 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_0963 YP_004312074.1 iron-chelate-transporting ATPase BAC0164 Protein 7e-58 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_0963 YP_004312074.1 iron-chelate-transporting ATPase VFG1042 Protein 7e-58 48
Marme_0963 YP_004312074.1 iron-chelate-transporting ATPase VFG0925 Protein 5e-53 45