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Name : Marme_0779 (Marme_0779) Accession : YP_004311898.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 838738 - 841359 bp Length : 2622 bp Strand : + Note : TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: vsp:VS_1326 protein disaggregation chaperone; SMART: ATPase, AAA+ type, core DNA sequence : ATGTCACAGGTAAAGTTAGGCAATCTTGTCGGAAAATTAGAGCCTGAGCTAAAGAATGCGCTTGAAGAAGCCGCTGGGTC AGCAATGAAGCAAACAGTACCTGCTATTGAGGTTGAGCACTGGTTTATTCAGCTCATCGTCAATAAAGAGGTAAATCTAA ATTCTTTTTTCCAACGTCAAAAAATTGATTTAAACGGATTGCTGACGGAGCTGACTGCCCGAGTTGAGCGTCTTGTAAAA GGGGCAACCGGACAGCCGACTATCAGTGCAACAGTCAGTGAAGCGATGGAGGAAGCATGGTTAATTGCATCCGTTAATTA TGGTCATGGTCAAATTACAAGCTTGCATCTGTTGCAGGCACTTGTTCAGTCAGACAGCTTTGGTATGAAGAAACTGTCTT TGGAGTCGCTTCAGAATGTTTCAACGGAAGCCTTGTCCGCACACATTGCCCAACTTAAAGTCGCAGGCGTTTCCAGTTCT TCATCAGCGTCGCCTAGTGCAGCAGAAGGCGCAACAGCCGCCCCTGTTGCGGGTGGTGCGTTGGACAAATACACTGTCAA CCTGACTCAACAAGCGCGCGATGGAAAAATTGACCCAATCTCAGGTCGAAACAGTGAAGTTCGCTTAGCGATTGATATTC TGTGCCGTAAGAGACAAAACAATCCAATATTGGTGGGCGAGCCTGGAGTTGGTAAAACGGCCGTCGTTGAAGGCTTGGCG CTTCGAATTGTCGAAGGTGAAGTGCCTCCTGTTATTCAAGGTGTCGAAATCCATTCACTTGACCTCGGTCTTCTCCAAGC AGGCGCAAGCATTAAAGGGGAGTTTGAGAACCGTCTTAAAGACGTTATCAATGAAGTGAAGAGCTCAGAAACACCAATCA TCGTCTTTATAGACGAGGCGCATACCTTGATTGGTGCTGGTGGCGCAGCGGGACAAAATGACGCCGCAAACTTATTGAAA CCCGCGTTAGCGCGTGGAGAATTCCGCTCGATTGCAGCAACAACATGGGCTGAATACAAAAAGTATTTCGAGAAAGACCC TGCATTAACTCGTCGTTTTCAGGTAGTTAAAGTTGAAGAGCCTGACGCTGAAGATGCATTGCAAATGTTACGTGGTGTAG CGGCGTCATTACGAAAACACCACGGTGTCTTTATACGTGAAGATGCGCTCGAAGCAGCGGTACACTTATCCATTCGTTAT CTTCCTGCTCGTCAATTGCCAGATAAAGCGATTAGCCTTTTGGATACCTCATGTGCCCGTATTGCGTTAACTCAAGGCGC GAAACCTGAAAAAGTAGAGCAGCTTGAACAACAAATTCGCTACTTAAACAGCGAGCTGTCGGCATTTGAAGTGGAAGATG CCGTTCTCACTGATCAGGCAGAGGATCGCGACGCTTTGCGTGACAGCATTGCTGAAAAAGAGGCTGAGCTTGAGTTATTG ATGGCACGTTGGGAGCAAGAAAAGTCGCTTGTTGATGAGATCACCGTTTTAAGTGAGGACATTGAGGCTAATCTTAAAGA AGGTGCGGACGCGACTAAACAGGCAGCACTTCAAACGAAAATGGATGATTTGTCTAAGTTGCAAGGCGATGATCCCCTCG TGTTTGCACTGGTTGATAGCCAAGTCATTGCATCAGTCATTGAGAGTTGGACGGGAATTCCTGCTGGCAACATGGTGAAA GGTGAAGTTGCTGAGCTTTTATCTCTTGAAGATGCATTACATAAGCGCGTTATCGGACAACAAGCGGGGATTAGTGAGCT TGCTAAGAGCATTCGTATTTCTCGTGCCGGCTTAACGGATAGCCGAAAACCGGTTGGTGTTTTCTTGATGTGCGGTCCAA GTGGTGTGGGTAAAACCGAAACTGCCATGGCACTTGCCGATGAAGTGTTTGGCGGTGGGGATAACTTGACGGTTATCAAC ATGACTGAGTTTAAAGAAGAGCATAAAATCTCTATGTTATTGGGCTCGCCTGCTGGGTATGTCGGGTTCGGTGAAGGTGG TGTATTAACCGAAGCCATTCGCCGTAATCCATACTCCGTTTTATTATTGGATGAAATGGAAAAAGCGCATCCAGGCGTAC ATGATTTGTTTTATCAGATTTTCGACAAAGGCCACATAAAAGACAGTGAAGGCCGTACGATCGACTTTAAGAATACGATT ATTGTGATGACGTCAAATGCGGCTGATCAAGCTATCTGCGATATCTGTAATGCGGCTGAAGATCGCCCTGTTAATGAAGA GCTTGTCGAAGAGATTCGCCCTGCACTTCAGCAATACTTCAAGCCTGCCTTTCTTGGGCGCGCGACCATCGTGCCTTACT ACCCATTAAATGCAGAAGAGCTTGGTAAGATCACTGAAATCAGTTTGAATCGAATTGCCAAAAAATTAAATGAAAAATAC AAAGCGGAATTTAGCTGGGACGACTCTTTTATCGAGTTTGTTGTCTCGCGCAATACGGATCCGACTACTGGTGGACGCGC TATTGAGCAAATTATCAATCGTTCACTTATGCCGCGATTGGCAGAGCAATGTATTCAACGATTAAGTGAAGGATTACCCA TTGAACGAGTGTCAGTGACCATTGAGCCAATGACAGCCGATTTGTCGCTTCATATAGAATAA Protein sequence : MSQVKLGNLVGKLEPELKNALEEAAGSAMKQTVPAIEVEHWFIQLIVNKEVNLNSFFQRQKIDLNGLLTELTARVERLVK GATGQPTISATVSEAMEEAWLIASVNYGHGQITSLHLLQALVQSDSFGMKKLSLESLQNVSTEALSAHIAQLKVAGVSSS SSASPSAAEGATAAPVAGGALDKYTVNLTQQARDGKIDPISGRNSEVRLAIDILCRKRQNNPILVGEPGVGKTAVVEGLA LRIVEGEVPPVIQGVEIHSLDLGLLQAGASIKGEFENRLKDVINEVKSSETPIIVFIDEAHTLIGAGGAAGQNDAANLLK PALARGEFRSIAATTWAEYKKYFEKDPALTRRFQVVKVEEPDAEDALQMLRGVAASLRKHHGVFIREDALEAAVHLSIRY LPARQLPDKAISLLDTSCARIALTQGAKPEKVEQLEQQIRYLNSELSAFEVEDAVLTDQAEDRDALRDSIAEKEAELELL MARWEQEKSLVDEITVLSEDIEANLKEGADATKQAALQTKMDDLSKLQGDDPLVFALVDSQVIASVIESWTGIPAGNMVK GEVAELLSLEDALHKRVIGQQAGISELAKSIRISRAGLTDSRKPVGVFLMCGPSGVGKTETAMALADEVFGGGDNLTVIN MTEFKEEHKISMLLGSPAGYVGFGEGGVLTEAIRRNPYSVLLLDEMEKAHPGVHDLFYQIFDKGHIKDSEGRTIDFKNTI IVMTSNAADQAICDICNAAEDRPVNEELVEEIRPALQQYFKPAFLGRATIVPYYPLNAEELGKITEISLNRIAKKLNEKY KAEFSWDDSFIEFVVSRNTDPTTGGRAIEQIINRSLMPRLAEQCIQRLSEGLPIERVSVTIEPMTADLSLHIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-152 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Marme_0779 | YP_004311898.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 0.0 | 46 |
| Marme_0779 | YP_004311898.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 1e-149 | 41 |
