|
Name : Marme_0073 (Marme_0073) Accession : YP_004311215.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Unknown Product : Fis family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3604 EC number : - Position : 87634 - 89274 bp Length : 1641 bp Strand : + Note : KEGG: mmw:Mmwyl1_0067 anaerobic nitric oxide reductase transcription regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; GAF DNA sequence : ATGACTCAAATTAGGCCGACCTCTGTGAATAAAGTGACTCAAAGTTCGTTATTAAACCTTGCGATGGATCTTGCCAGTGT GACCGCTCAATCTAATCGTTTTGAATTGCTTATTAGCGCGGTACGTGGCGCGATAAATTGCGATGCGGTTGTGTTGTTGG AATGTCGAGAAAACGTATTAGTACCGCTTGCTCAACGAGGGTTATTGGATGATGTTTTAGGGCGTCACTTTGTAATTGAT GAGCATCCAAGGTTAGCTGCCATCTGCGAAGATCGATATCCGGTGCGATTCGCTGCCGATTCTCCGTTACCCGATCCTTA CGATGGCATGGTTGTTGGACATGATGATCTTTCGGTGCATTCCTGTATGGGAATCCCGTTGTATTTGGAAGGCTGCTTGA TCGGAGCGGTCACATTAGACAGCATCGCGCCGAATGAATTTGATGAAATCGACAGTCGTGCTTTGGACATCATTGCAGCG ATGGCGGCAATGGCTTTGAATACTTCGATGTTAATGTCGAAGCTCGAACGAAAATCGCATCGTGCGCAGTCTTTAGTTCA AGCGCTTACTGAGGATGAGCATTTAAAAGAAGGTTCATCAATATTGGGTCAGAGTGAGGTTATGTCTAAACTGACGCAAT CGATTGAACTGGTCGCACCGTCGGATTTTGCTGTGTTGATAGAAGGTGAAACAGGCGTGGGTAAGGAGCTGGTCGCCCGA AAACTTCACAGCTTGTCACAACGTGCCAGTGCGCCAATGGTGTACGTTAATTGTGCTGCTATTCCGCAACACCTAATCGA AAGTGAGCTGTTTGGTCATGTAAAAGGGGCATTTACAGGTGCAGATAGGGATCGAGACGGTAAGTTTTTGCTTGCTGATG GTGGTACGTTATTTCTGGATGAAATAGGGGAGTTGCCGTTAGAAGTCCAAGGCACATTATTGCGAGCGATTCAGAATCAA GAAATACAGGCTGTCGGTCGAGATAAAACGAAGAACGTCGATGTGCGCATTATCGCAGCGACGAACCGCGTCCTCAGTGA TGAAGTTGAGAACAAACGGTTTCGTGCGGATTTGTTCCATCGGCTAAGTGTTTTTCCTGTCCATGTGCCGCCACTGAGAG AGCGGCAGGGTGATACTCTCCTATTAGCGGGACATTTTGCTGAACAGTACCGTAGAAAGCTTGGTTTACGGCAGCTTATT ATTTCGGAGTCCGCTGGTGAGGTTCTTAGAGGCTATCGATGGCCGGGCAATGTGAGAGAGCTAGAACACGTTATTTCCAG AGCGGCGTTGCTTGCACGATCTGATCAACAATCAGAATTAACGGTAATTGGACCAAGTCATTTAACCGGTATTCAGGAAG GGAAATATACACCGTTCTCTCAACCTGAACCTCAACTTAGCAGTGAAGATGCCCGTCAATTCAGTTCCAAAGATGAGTTT TCCAGTGCTGATGTTCACCCAGTCGTGAATTTAAAAGAGGCAACGGAGCGTTATCAAAAAGGTATCATTCTTGATGCTTT GCGTCGAAAAGAGGGGAATTGGGCGCAGGCCGCACGCGAGTTATCCATGGATCGCGCTAATTTGGTACGGCTTGGAAAAA GGCTTGGGATTACGGTTCATAAAAGTGTCGTTCCTAACTGA Protein sequence : MTQIRPTSVNKVTQSSLLNLAMDLASVTAQSNRFELLISAVRGAINCDAVVLLECRENVLVPLAQRGLLDDVLGRHFVID EHPRLAAICEDRYPVRFAADSPLPDPYDGMVVGHDDLSVHSCMGIPLYLEGCLIGAVTLDSIAPNEFDEIDSRALDIIAA MAAMALNTSMLMSKLERKSHRAQSLVQALTEDEHLKEGSSILGQSEVMSKLTQSIELVAPSDFAVLIEGETGVGKELVAR KLHSLSQRASAPMVYVNCAAIPQHLIESELFGHVKGAFTGADRDRDGKFLLADGGTLFLDEIGELPLEVQGTLLRAIQNQ EIQAVGRDKTKNVDVRIIAATNRVLSDEVENKRFRADLFHRLSVFPVHVPPLRERQGDTLLLAGHFAEQYRRKLGLRQLI ISESAGEVLRGYRWPGNVRELEHVISRAALLARSDQQSELTVIGPSHLTGIQEGKYTPFSQPEPQLSSEDARQFSSKDEF SSADVHPVVNLKEATERYQKGIILDALRRKEGNWAQAARELSMDRANLVRLGKRLGITVHKSVVPN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| norR | ABD94719.1 | putative nitric oxide reductase transcriptional regulator | Not tested | ExoU island B | Protein | 3e-101 | 48 |
