Gene Information

Name : Marme_0385 (Marme_0385)
Accession : YP_004311521.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 401512 - 402354 bp
Length : 843 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: mmw:Mmwyl1_0466 ABC transporter-like protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGAGGTTAAATACTTCGTGGCCATTAAATAGTGAGAAGCTCTCTTTGGCTTATGATTCGTCTGATACCGTCATCGATTC
ATTGGACTTAACGATCGAATCGCAAAAGGTGACAGTATTAGTGGGCGGTAATGGTTGTGGTAAATCGACACTATTAAAAT
CGTTTGCGCGACTTTTAAAGCCTATCTCGGGGCTGATTTTTCTTGAAGGGCAGAATATCAATCAACTTCCCGGAAAGGGC
GTCGCTCGAAAAATGGCAATATTGCCCCAAGGGCCTGTTGCGCCAGAAGGTCTGACGGTTGAACAGTTGGTGAAGCAAGG
CAGGTATCCCCATCAAAATTGGCTCCAAAATTGGAGTAAAGAAGACGAGTATTATGTGCGTAAAGCGCTAATTGATACCA
ATATGACGGCCTATTCTGATCGGCCTATTGAAGTGTTATCTGGTGGCCAACGTCAAAGAGCTTGGATTGCAATGGCTTTG
GCTCAAAATACTGAAATTCTGTTGTTAGACGAACCGACAACGTATCTAGACTTAACCTATCAAATTGAAATACTGGACTT
ATTGTTTGAATTGAACAGGGAGCAAAAAGTCACCATTGTCATGGTTCTGCATGATCTGAATTTAGCCTGCCGCTATGCTG
ATCAGCTTATTGCATTGAAAGATGGTGGGGTATATTGCCAAGGTGCGCCTGAGAAGGTATTGAATGCAGGGATGGTTGAA
GCGGTGTTTGGTATGCGTTGTCATATCGCTAAGGACCCTTTATTTGGTACACCTATGTGTGTCCCTCATGGTAAAGGAAG
AGTTATAGTCGATGAGCAAGCTGAGCAGAATCACACCGCATGA

Protein sequence : 
MRLNTSWPLNSEKLSLAYDSSDTVIDSLDLTIESQKVTVLVGGNGCGKSTLLKSFARLLKPISGLIFLEGQNINQLPGKG
VARKMAILPQGPVAPEGLTVEQLVKQGRYPHQNWLQNWSKEDEYYVRKALIDTNMTAYSDRPIEVLSGGQRQRAWIAMAL
AQNTEILLLDEPTTYLDLTYQIEILDLLFELNREQKVTIVMVLHDLNLACRYADQLIALKDGGVYCQGAPEKVLNAGMVE
AVFGMRCHIAKDPLFGTPMCVPHGKGRVIVDEQAEQNHTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-59 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-53 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-57 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-57 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-54 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-54 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-54 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-54 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_0385 YP_004311521.1 iron-chelate-transporting ATPase BAC0164 Protein 2e-53 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_0385 YP_004311521.1 iron-chelate-transporting ATPase VFG0925 Protein 4e-63 50
Marme_0385 YP_004311521.1 iron-chelate-transporting ATPase VFG1042 Protein 2e-53 45