Gene Information

Name : Marme_0369 (Marme_0369)
Accession : YP_004311505.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 383636 - 384427 bp
Length : 792 bp
Strand : -
Note : KEGG: rlt:Rleg2_0704 transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response

DNA sequence : 
ATGAAAAAAGTACTCATCGTTGCCATCACCGTTTTTGCTTTGTCTATTACGAACGCAACAACCGCATGGGCAAATCAGCC
CGCTGCTGACAAACAAGTAAACGTCGCCGAGCCAACAATCACCATAGTGGAAGCAAAAGAAATACGTGATTGGCTCTGTG
AAAGTCTCACTAAAGTAGGTCATGTTGTCGATGCCTTTGATAAAGGCAGGGAAGCTTTAATTGCCGCCTCCACACGCGAC
TATCATGTGCTCATTTTAGATTGGATGGTCCCTGATCTAGATGGTATTGCCGTATTAAAAACACTGCGTGCAGCCAAAAT
AAACACCTCTATTATGATGCTTACCGCCCTCGGTGACGTCGATGATCGAGTCACAGGGTTAGAGGCAGGCGCAGACGATT
ATCTCGCAAAACCGTTTGCCATCTCTGAGTTACTTGCTCGGATCAACGCACTGGGAAGACGTACATTGTCAACGTCAATG
GAACAACAGCAAGACACCACGCTAGTATATGAAGACCTTGAACTGGATCTGTTGGCGTTAAAGTGCCACAGAGCTGACGA
GAATATTCTCTTGAATACCAAAGAAATCAGGCTACTCGAAACACTGATGCGTAACCAAGGTCGGGTAATGACACGCTCAA
TGCTGTTAGAACGAGTGTGGAATATTGATTTTAACCCTGAAACCAGTATTGTAGAAACTCACATCAGTCGACTAAGGGCG
AAAGTAGATAAGCCCTTCCCCACATCACTGATCCGAACCGTTCGCGGAGCAGGATATATCTTTGGCAATTAA

Protein sequence : 
MKKVLIVAITVFALSITNATTAWANQPAADKQVNVAEPTITIVEAKEIRDWLCESLTKVGHVVDAFDKGREALIAASTRD
YHVLILDWMVPDLDGIAVLKTLRAAKINTSIMMLTALGDVDDRVTGLEAGADDYLAKPFAISELLARINALGRRTLSTSM
EQQQDTTLVYEDLELDLLALKCHRADENILLNTKEIRLLETLMRNQGRVMTRSMLLERVWNIDFNPETSIVETHISRLRA
KVDKPFPTSLIRTVRGAGYIFGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-32 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_0369 YP_004311505.1 transcriptional regulator BAC0125 Protein 8e-39 45
Marme_0369 YP_004311505.1 transcriptional regulator BAC0083 Protein 2e-37 45
Marme_0369 YP_004311505.1 transcriptional regulator BAC0638 Protein 9e-34 45
Marme_0369 YP_004311505.1 transcriptional regulator BAC0347 Protein 3e-36 43
Marme_0369 YP_004311505.1 transcriptional regulator BAC0197 Protein 3e-35 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_002952.2859905.p0 Protein 9e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_009641.5332272.p0 Protein 7e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_013450.8614421.p0 Protein 7e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_007793.3914279.p0 Protein 7e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_007622.3794472.p0 Protein 8e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_002745.1124361.p0 Protein 7e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_009782.5559369.p0 Protein 7e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_002951.3237708.p0 Protein 7e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_003923.1003749.p0 Protein 6e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator NC_002758.1121668.p0 Protein 7e-27 43
Marme_0369 YP_004311505.1 transcriptional regulator BAC0111 Protein 8e-41 42
Marme_0369 YP_004311505.1 transcriptional regulator NC_012469.1.7686381. Protein 4e-31 41
Marme_0369 YP_004311505.1 transcriptional regulator HE999704.1.gene1528. Protein 1e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_0369 YP_004311505.1 transcriptional regulator VFG0596 Protein 2e-32 42