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Name : Marme_3376 (Marme_3376) Accession : YP_004314428.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3705324 - 3706301 bp Length : 978 bp Strand : - Note : SMART: cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: mmw:Mmwyl1_1123 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); cystathionine beta-synthase, core DNA sequence : ATGAATCATAGCTCTCACGCATTACGTTTAAGCGATGATGCAATTCTCCAAAGCGCTAGAACGACTCTGGACACTCAGGC AAATGCCTTGACTGGATTGTCTCAACGACTTTCAAATGAATTCTCTCAAGCGGTAAAGATGATCTTGGCGACATCTGGGC GCGTTATTGTTTGTGGAATGGGTAAATCTGGGCTCATTGGCAAAAAGATCGCCGCTACTTTAGCCTCTACAGGCACACCT TCCTTTTTTCTTCATCCCGGAGAAGCGTTTCATGGCGATTTAGGCATGATTCAAAAAGAAGACCTTGTTTTACTGATCAG CTATTCAGGGGAAACGGAAGAGGTAATTCGCTTGCTTCCATCGTTGAGTAATTTTGGTAATCCCCTTATCGCGATTGCGG GCAACCCTTCTTCTACCTTGGCGACGCACAGTCAGTGTTTCTTAAATATTGCTGTAGATCGAGAGGCTTGCCCAAATAAT TTGGCTCCGACAACCTCTACCACGCTGACTGCTGCAATTGGCGATGCCTTAGCGGTGGCTTTGATGGAATGCCGAGACTT TCAGCCTCAAGATTTTGCCCGTTTTCACCCGGGCGGCAGTTTAGGTAGAAAGCTCCTGACGCGTGTTAAGGATTTGATGC ATAAAGATAACCTTCCAACCTGTGCGCCTTCTATGCCGTTATCTGATGCTATTTCAGTGATGACAACAGGACGCATGGGG GTGGTGCTAATTGAAGATGAAAAACGTATTGTTGGCATCTTTACTGATGGGGATCTACGCCGTGCCTTATTAACAAAAGG TGGGGATATTATGTCGAAGTCGATGGCAGAATTGATGACAGCAAACCCTAAGACGATACATGAAAGTGTGATGATCGTAG AAGCGGAAGAGCGTATGATCAATGAAAAAATCACCTTGCTTGTCGTTGTAGACGATTCAGATTCTGTTGTAGGGTTGTTG GAAATTTACGATCGATAG Protein sequence : MNHSSHALRLSDDAILQSARTTLDTQANALTGLSQRLSNEFSQAVKMILATSGRVIVCGMGKSGLIGKKIAATLASTGTP SFFLHPGEAFHGDLGMIQKEDLVLLISYSGETEEVIRLLPSLSNFGNPLIAIAGNPSSTLATHSQCFLNIAVDREACPNN LAPTTSTTLTAAIGDALAVALMECRDFQPQDFARFHPGGSLGRKLLTRVKDLMHKDNLPTCAPSMPLSDAISVMTTGRMG VVLIEDEKRIVGIFTDGDLRRALLTKGGDIMSKSMAELMTANPKTIHESVMIVEAEERMINEKITLLVVVDDSDSVVGLL EIYDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-62 | 52 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-62 | 52 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-62 | 52 |
