Gene Information

Name : Marme_0330 (Marme_0330)
Accession : YP_004311469.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : 2-aminoethylphosphonate ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : 3.6.3.31
Position : 344480 - 345547 bp
Length : 1068 bp
Strand : +
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: 2-aminoethylphosphonate ABC transporter, ATP-binding component PhnT2; KEGG: hch:HCH_03087 spermidine/putrescine ABC transporter ATPase; PFAM: ABC transporter-like; transport-associated OB, type 2

DNA sequence :
ATGAGCAGCACTTATTTAGCGCTTAATAATATTCATCAAAAATTTGGCACGCATCTCGCCTTAAACGACGTATCTTTGGA
TGTGGCTGAAGGCGAATTTGTTTGTTTTTTGGGGCCTTCTGGGTGCGGTAAAACCAGTTTACTTCGTATTATCGCTGGGC
TTGATTTACCAACCGGTGGACAGGTTAATCAGGCTGGCAAAGACATTACGTATGCACCTGTTAAGCATCGTGATTTTGGT
ATTGTATTTCAGTCCTATGCCTTGTTTCCAAACCTCACAGTAGAGGACAACATTGCATATGGGCTTGTTACTCAAAATGT
TTCGGCGCAAGAGCGACGAAATAGAGTAAAAGAGCTGCTTGCTACGGTCGGCTTATCGGGTAGTGAGCGCAAGTATCCTG
CTCAACTTTCTGGAGGGCAACAACAACGTGTTGCATTAGCTCGTGCTTTGGCAACGTCACCTGGGCTACTTTTGTTGGAT
GAGCCACTTTCTGCTTTGGATGCACGTGTAAGGGCGCATCTTCGTCAAGAGATAAAGCAGCTTCAAGAAAAGCTAGGTGT
GACCACGATAATGGTAACCCATGACCAGGAAGAAGCGTTGACCATGGCAGATAAAATTGTCGTAATGAACCACGGAATTA
TTGAACAGATTGGCTCTCCCCAAACGGTCTACAGTCAGCCAAAATCTGCGTTTGTGGCGTCATTTGTCGGTGAAATGAAC
TTCTTACAGGCGGACATCGCTGGCGACCACTTACTTAAATCGGGAGATCATACGATTGAGTTTGATGGACAACTTGGACA
AAAGAAAAATGCCATTCAAGTTGCCATTCGTCCTGAAGATGTGCGTTTTCTTGCTCAAGGGCAGGATCAAAACACCTTTA
CCGGCCGCGTTGCTCACACTGAGTTTTTAGGCTCCCGTGTGCGATCAACCTTGAAGCTAGATGGTATTGAAGCGCCTTTG
TTGGCCGACGTCTCTATGAATGAAATGGCAACACTTAACATTGAAGCAGGGCATTCAGTTATTTGCCAGTTACCAAAAGA
TCGCTTGCATGTATTTGAAGGGGTGTAA

Protein sequence :
MSSTYLALNNIHQKFGTHLALNDVSLDVAEGEFVCFLGPSGCGKTSLLRIIAGLDLPTGGQVNQAGKDITYAPVKHRDFG
IVFQSYALFPNLTVEDNIAYGLVTQNVSAQERRNRVKELLATVGLSGSERKYPAQLSGGQQQRVALARALATSPGLLLLD
EPLSALDARVRAHLRQEIKQLQEKLGVTTIMVTHDQEEALTMADKIVVMNHGIIEQIGSPQTVYSQPKSAFVASFVGEMN
FLQADIAGDHLLKSGDHTIEFDGQLGQKKNAIQVAIRPEDVRFLAQGQDQNTFTGRVAHTEFLGSRVRSTLKLDGIEAPL
LADVSMNEMATLNIEAGHSVICQLPKDRLHVFEGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-22 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_0330 YP_004311469.1 2-aminoethylphosphonate ABC transporter ATP-binding protein VFG1206 Protein 3e-27 44