Gene Information

Name : Marme_3285 (Marme_3285)
Accession : YP_004314337.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 3602683 - 3603852 bp
Length : 1170 bp
Strand : -
Note : TIGRFAM: nucleotide sugar dehydrogenase; KEGG: mmw:Mmwyl1_3483 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-te

DNA sequence :
ATGAAGATAGCTGTAGTCGGAACAGGGTATGTCGGACTTTCTAACGCATTATTGCTCGCAAAACGAAATGAAGTGGTTGC
ATTGGATATTGTTTCCGAGAAAGTTGAAATGCTAAACAAAGGATTGTCTCCTATAGAGGATGACGATATCCAACGCTACT
TAAAAGAAGAGGACCTTAACTTTAAAGCGACATTGGTTAAAGAGGAGGCATTATCTGATGCTCGCTATGTCATTATTGCA
ACGCCAACGGATTATGACCCTGAAATGAATTACTTCAATACACATCATGTGGAGAGCGTTATTCAGGAGGTAAAGACGAT
TAACCCTGATGCAGTAATGGTTATTAAGTCGACGGTACCTGTGGGGTTCACTAAGGATTCAAAAGAACGGTTTGGAGTAG
AAAATCTTATTTTTTCTCCTGAGTTTTTAAGAGAGGGCAAAGCGCTTTACGATAACTTATATCCTTCTCGAGTTATCGTT
GGCGAAAAGTCGGAACGGGCGAAGGTGTTTGCAGAGCTTCTTGTTCAAGGATCTAATAAAGTTGATGTGGATGTTTTATT
CACAGACTCAACTGAAGCTGAGGCCATTAAATTGTTTGCGAATACATACTTAGCAATGCGTGTCGCTTTTTTCAATGAGC
TGGATACCTATGCAGAGACGCTGAACTTGGATTCTCGACAAATTATTGAAGGGGTCGGATTAGATCCGCGCATTGGGAAA
CATTACAATAACCCGTCATTTGGGTACGGAGGGTATTGCTTGCCAAAAGACACGAAACAGCTTTTGGCGAATTATGATGC
GGTTCCAAATAATTTGATTAGGGCGATAGTTGACGCAAATGTAACGCGCAAAGACTTTATAGCGAATGAAATTTTGAAGC
GCAAACCCAAAGTAGTCGGTATCTACCGTTTAGTAATGAAAGCGAAGTCTGATAATTTTCGTGCGTCTGCAATTCAAGGC
ATTATGAAACGAATAAAAGCGAAAGGGATAGAAGTTATAGTCTTTGAGCCAGCGTTAGATGCAGAAAGCTTCTTCAATTC
AAGAGTGATTGATGATCTTGAAAGCTTTAAAGCGGAATCAGATGTCATTATTGCCAACCGGGTGACTGAGTCTATTCATG
ATTGTATGGAAAAAGTATATACACGCGACTTATTTGGTGGGGATTTGTAG

Protein sequence :
MKIAVVGTGYVGLSNALLLAKRNEVVALDIVSEKVEMLNKGLSPIEDDDIQRYLKEEDLNFKATLVKEEALSDARYVIIA
TPTDYDPEMNYFNTHHVESVIQEVKTINPDAVMVIKSTVPVGFTKDSKERFGVENLIFSPEFLREGKALYDNLYPSRVIV
GEKSERAKVFAELLVQGSNKVDVDVLFTDSTEAEAIKLFANTYLAMRVAFFNELDTYAETLNLDSRQIIEGVGLDPRIGK
HYNNPSFGYGGYCLPKDTKQLLANYDAVPNNLIRAIVDANVTRKDFIANEILKRKPKVVGIYRLVMKAKSDNFRASAIQG
IMKRIKAKGIEVIVFEPALDAESFFNSRVIDDLESFKAESDVIIANRVTESIHDCMEKVYTRDLFGGDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 5e-91 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_3285 YP_004314337.1 nucleotide sugar dehydrogenase VFG0963 Protein 2e-101 54