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Name : Marme_3223 (Marme_3223) Accession : YP_004314275.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 3540927 - 3541682 bp Length : 756 bp Strand : - Note : KEGG: mmw:Mmwyl1_3434 flagellar biosynthesis protein FliP; TIGRFAM: flagellar transporter FliP; PFAM: type III secretion system inner membrane P protein DNA sequence : ATGAAGCTTAGAGCATTATATAGTTTAGTTTTACTTCTTGCTGGTTTGGTTGTTCCTCTTCAAGGGTTAGCAGAGACTGG GCTTCCGGCAGTCTCGGTCACAACGAATCCAGATGGCAGTCAAGAATATACTGTCTCACTTCAAATACTCTTTATAATGA CTGCATTAACGCTATTGCCCTCAGCGTTAATTATGATGACTTCATTTACTCGAATTATTATTGTACTGTCTATTCTTCGG CAAGCTTTAGGTTTGCAGCAAGCGCCTTCAAATCAAATTATTCTCGGTATGGCGCTGTTTTTAACTCTTTTCATAATGGG CCCTACTTTAGACCAAATTAATGAATCTGCACTTCAGCCTTATTTGAGTGACAACATGACGTCCTTGCAGGCAGTTAAAG CCGCTTCGATTCCAATCCGGGAATTTATGTTGGGTCAAACAAGAGAGGATGATATTGCTCTATTTGTTAAGTTGGCTGGT AAAGAAGGGCAGATTCCCTCTTTAGAGGATCTCCCTTTTACAATACTGATGCCTGCTTTTGTGACTAGTGAACTTAAAAC CGCTTTTCAAATTGGTTTTATGTTGTTTATTCCTTTTCTTATTGTGGATATGGTGGTCGCGAGCGTATTGATGGCGATGG GCATGATGATGCTATCTCCAATCATCATTTCATTGCCATTTAAGATAATGCTCTTTGTTATGGTTGATGGCTGGTCTATG ATTATGGGTACTCTTGCCGCTAGTTTTGGAGTTTAG Protein sequence : MKLRALYSLVLLLAGLVVPLQGLAETGLPAVSVTTNPDGSQEYTVSLQILFIMTALTLLPSALIMMTSFTRIIIVLSILR QALGLQQAPSNQIILGMALFLTLFIMGPTLDQINESALQPYLSDNMTSLQAVKAASIPIREFMLGQTREDDIALFVKLAG KEGQIPSLEDLPFTILMPAFVTSELKTAFQIGFMLFIPFLIVDMVVASVLMAMGMMMLSPIIISLPFKIMLFVMVDGWSM IMGTLAASFGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 7e-32 | 42 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 7e-32 | 42 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 5e-33 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-31 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 5e-32 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 7e-32 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 5e-32 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 7e-32 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 5e-32 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 6e-32 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 5e-32 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 6e-32 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 5e-32 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 5e-32 | 41 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 4e-31 | 41 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 1e-32 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Marme_3223 | YP_004314275.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 1e-72 | 67 |
| Marme_3223 | YP_004314275.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 2e-66 | 60 |
| Marme_3223 | YP_004314275.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 1e-56 | 56 |
| Marme_3223 | YP_004314275.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 9e-61 | 56 |
| Marme_3223 | YP_004314275.1 | flagellar biosynthetic protein FliP | VFG0827 | Protein | 3e-32 | 41 |
| Marme_3223 | YP_004314275.1 | flagellar biosynthetic protein FliP | VFG0715 | Protein | 2e-31 | 41 |
