Gene Information

Name : Marme_2954 (Marme_2954)
Accession : YP_004314011.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3247140 - 3248066 bp
Length : 927 bp
Strand : +
Note : PFAM: porphobilinogen deaminase, N-terminal; porphobilinogen deaminase, C-terminal domain; TIGRFAM: tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: tetrapyrrole biosynthesis, hydroxymethylbilane synthase; KEGG: mmw:Mmwyl1_3591 porphobilino

DNA sequence : 
GTGAAAGATAAGATTGTGATCGCGACACGGGAAAGTAAACTGGCATTGTGGCAAGCAAACACCGTAAAAAAACAGCTTGA
AACGCTTTACCCAAACCTTACCGTCGAGCTTTTAGGGATGACAACCAAAGGCGATCAAATCCTAGATTCACCACTATCCA
AAATCGGCGGCAAAGGCCTTTTCGTCAAGGAGCTCGAAAGTGCATTGCTAGACGGCCGAGCGGACATCGCAGTACATTCA
ATGAAAGATGTTCCTATGGCATTTCCAAAAGGCTTAGGGCTTGCGGTCATATGTGAGCGCGAAGACCCATCCGATGCGTT
TGTATCGAACAAGTACAGCAGCTTAGACGAACTCCCTAAAGGCAGCGTTCTTGGCACTTCTAGTCTTCGAAGAGCGTGCC
AAATTCAGCAACATAGGCCCGACCTCAAAATCGAAAGTTTACGAGGCAACGTCGGCACTCGATTAGGCAAACTCGATAAT
AATGAATACGATGCCATCATTTTGGCTACCGCGGGATTGATTCGGCTGGAGCTAGAAGATCGCATTAAAAGCCGCTTATC
CGATACCTACTGCCTGCCTGCAGGCGGACAAGGCGCAATGGGGATAGAGTGCAGAGACAACGATAAAGACATACTCGAAT
TGCTCGCACCGCTTCAGCATCAAGACACCTACTATCGAGTAACCGCAGAAAGAGCCGTCAACAAACGCTTAAACGGTGGC
TGTCAGGCTCCAATCGCATGCTTTGCGACATTAAGTGACGGTGAAATTTGGCTGCGAGGACTGGTCGGAAGTACCGATGG
CCAACAAATGATTACTGGCGACATTAAGGGGGCTCCTCAAAATGCCGAGCAGTTAGGCATTACGCTTGCTGAAGACCTGC
TTAACCGTGGTGCTCAAAGAATCCTTGATGACGTATACGGTAAGTAA

Protein sequence : 
MKDKIVIATRESKLALWQANTVKKQLETLYPNLTVELLGMTTKGDQILDSPLSKIGGKGLFVKELESALLDGRADIAVHS
MKDVPMAFPKGLGLAVICEREDPSDAFVSNKYSSLDELPKGSVLGTSSLRRACQIQQHRPDLKIESLRGNVGTRLGKLDN
NEYDAIILATAGLIRLELEDRIKSRLSDTYCLPAGGQGAMGIECRDNDKDILELLAPLQHQDTYYRVTAERAVNKRLNGG
CQAPIACFATLSDGEIWLRGLVGSTDGQQMITGDIKGAPQNAEQLGITLAEDLLNRGAQRILDDVYGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-83 60
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-83 60