Gene Information

Name : Marme_2834 (Marme_2834)
Accession : YP_004313893.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 3103445 - 3104227 bp
Length : 783 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: dda:Dd703_1495 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACAATACTTAACGCACACTCTGTCACGCTGAGCTATGATCAAAATGAAATTGCAAAAGACCTCAGTGTTTCGATTCC
TGAGGGTAAGTTCACTGTAATCGTTGGGCCAAATGCGTGCGGCAAATCGACCCTTCTAAGAGCCTTAAGCCGATTATTAC
CCCCTCAAAAAGGTCAAATACTGCTCGATGGTGAAGACATTCATTCACTGACGACTAAAACCGTTGCTAAGCGCTTGGGC
CTGTTACCACAAACAGCTACCGCACCCGATGGGATTAAAGTGACCGACCTTGTCGCGCGAGGCCGATACCCTCACCAAAA
GTGGTTTCAACCATGGAGCGAAGAAGATCAACGAGCTGTGAACCTAGCGTTGGACGTAACAGACACGGCTCAGTTCGCCT
CTCAACAGGTAGATCAGCTGTCAGGCGGGCAAAGGCAACGGGTCTGGGTCGCAATGGCATTAGCACAAGAAACGCCACTG
CTGCTTCTAGATGAACCGACGACCTATCTAGACATCGCTCACCAAATCGAGCTATTAGATCTTTTTAAAGACCTTAATTT
AAAAAACGGACGTACATTGGTTGCTGTGCTTCACGACCTCAATCACGCCTGTCGCTATGCTGATCATCTTATTGCGATGA
AATCAGGACGCATCATCGCCACGGGCAACCCTAACGACATTGTCAACGAAACCCTTATCGAAAATGTATTTGGCTTGCGA
TCCGTCATCATAAAAGACCCTATTTCGGGTACACCGATGGTTGTCCCTAAGGGGAGATATTAG

Protein sequence : 
MTILNAHSVTLSYDQNEIAKDLSVSIPEGKFTVIVGPNACGKSTLLRALSRLLPPQKGQILLDGEDIHSLTTKTVAKRLG
LLPQTATAPDGIKVTDLVARGRYPHQKWFQPWSEEDQRAVNLALDVTDTAQFASQQVDQLSGGQRQRVWVAMALAQETPL
LLLDEPTTYLDIAHQIELLDLFKDLNLKNGRTLVAVLHDLNHACRYADHLIAMKSGRIIATGNPNDIVNETLIENVFGLR
SVIIKDPISGTPMVVPKGRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-57 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-57 51
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-57 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-57 51
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-53 48
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-49 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-49 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-44 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-40 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-43 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-43 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-43 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_2834 YP_004313893.1 iron-chelate-transporting ATPase BAC0164 Protein 9e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_2834 YP_004313893.1 iron-chelate-transporting ATPase VFG0925 Protein 1e-65 58
Marme_2834 YP_004313893.1 iron-chelate-transporting ATPase VFG1042 Protein 8e-45 44