Gene Information

Name : Marme_2833 (Marme_2833)
Accession : YP_004313892.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 3102392 - 3103432 bp
Length : 1041 bp
Strand : +
Note : PFAM: ABC transporter permease; KEGG: yen:YE3620 iron-enterobactin transporter permease

DNA sequence : 
ATGATGAAGACCTTCATAAGAGCAAGTCAAAGCTCACTCCCCTCCTACAAACCGAGCCGAACCTTCATTGTGGTTGTGTT
TGGATTGTTTGCCCTGTCTTTTTTCTCATTATTTAACGGACAACTGTCACACAGCCAAATAACAGACCTAGCATTAAAAA
TCACCCATGGCTCGCTGTTTGAGCCGATACAGTCAACAGTTATTTGGCAATGGCGCGCGCCTCGTATTTTTTCAGCGATC
ATAATCGGCGCTGCACTTGGAGTCAGTGGCGCTATCTTTCAATCTTTAGTTAAAAACCCTCTTGGTAGTCCCGATGTCAC
GGGGTTTAATGTCGGAGCCTTTACGGGCGTGCTGCTGACAATGGCCTTCATTGGCACGCAATTTTGGTTCATCGTATCTG
GCGCCATTGGCGGCGGATTATTTGCTGCACTACTCGTCTATTTGTTCGCCTATCGTAATGGCATGTCTGGGTTCAGGCTG
ATCATTGTAGGCATCGCAATCAGCGCCATGCTGACCGCCTTTAATATGTGGCTTTCTCTCTATGTATCTCTCGAAACCGC
GATGACAGCAGCACTTTGGAGTATCGGTTCCTTAAATGGCATAACATGGGAAAAGGCGCTTCCTATCAGTCTATTTTTAG
GCTTTTTGCTTATCGTTTCTGCGTTTCTTGTGACCAGAATGAAACTGCTGGAAATGGGCGACGATTTAGCAGCGGCTCTG
GGCGTAAGCGTTAATAAAACTCGACTCTTACTATTGTTGCTCGGAGTTTGTTTAACAGCGGCTCCAACCGCTATAACAGG
GCCCATTGCTTTTATCTCTTTAGCTGCGCCCCAAATAGCCAAACGATTAAACCTATCTTCAAAAAACACCAACGAAAGTT
CACTCTTTGCAGCGGCGTTAATGGGGGCATTGTTACTCTTGTCTGCGGACTGTCTCGCACAATACGCATTACCAAGCACC
AAGCTGCCTGTGGGGTTAGTCACGATCAGTGTGGGTGGTCTATATCTCGTATATTTAATCTCAAATGAATCAAAAAACTA
A

Protein sequence : 
MMKTFIRASQSSLPSYKPSRTFIVVVFGLFALSFFSLFNGQLSHSQITDLALKITHGSLFEPIQSTVIWQWRAPRIFSAI
IIGAALGVSGAIFQSLVKNPLGSPDVTGFNVGAFTGVLLTMAFIGTQFWFIVSGAIGGGLFAALLVYLFAYRNGMSGFRL
IIVGIAISAMLTAFNMWLSLYVSLETAMTAALWSIGSLNGITWEKALPISLFLGFLLIVSAFLVTRMKLLEMGDDLAAAL
GVSVNKTRLLLLLLGVCLTAAPTAITGPIAFISLAAPQIAKRLNLSSKNTNESSLFAAALMGALLLLSADCLAQYALPST
KLPVGLVTISVGGLYLVYLISNESKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 3e-40 49
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 3e-40 49
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 3e-40 49
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 7e-40 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_2833 YP_004313892.1 ABC transporter permease VFG0928 Protein 1e-42 53