|
Name : Marme_2832 (Marme_2832) Accession : YP_004313891.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Virulence Product : ABC transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 3101332 - 3102381 bp Length : 1050 bp Strand : + Note : PFAM: ABC transporter permease; KEGG: ske:Sked_37320 Fe3+-siderophore ABC transporter permease DNA sequence : ATGCAAGCCTCTGACTCCTCACTAGTAAACTCTGTACGAATACAGGGACATGTTTCTTTAACGCGAAAAAAGCGCTTGTT CTGGCTAACCGCGAGTATCGCTGTGCTTCTGATTGCAATGGTAGTAAGTCTTGCTATTGGCTCTAGGCCTATTTCTGTTT CCACTATAATTCAGATTCTTCAAGGAAGGGATCTTGGGCTAGACAGTGCCATAATATGGGAAGGAAGGATACCTAGGACA TTAAACGGACTGTTTGTCGGGATGGCACTTGGCGTATCAGGCGCACTTATTCAGGCGATTACTCGAAACCCTCTCGCTGA TCCAGGCATATTAGGCGTAAACGTTGGAGCGAGCTTAGCCATTGCAATTGGTATTGTTTTTTTAGGCGTCACGACACTTT GGGAATTTTTTATATTTTCTTCGGTTGGCGCGCTCGTAACGAGTCTACTGGTCTACGCCATCGGACAAACGAAAGGACGC CCAGACCCTCTCAAACTCACATTAGCAGGCGTGGCTATTGGCGCGGTTCTGGGTGGAATTAGTTCGGGGCTGACCCTCTT TAACCCTAATGCGTTTGATGCGGTACGGTTTTGGGTTGTTGGCAGCTTAGACGCAAGAACATTAGATATTCCCCTATTTA TCGCACCAGTCGTGACACTTGGCTGCTTAGGCGCATTCGCTCTAACGCCCTCGTTAAATGCAATGGGCTTAGGAGAAGCA CTGGCATCAACGCTCGGTACTCATATCGTCAAAGTCCAAGCAGCGAGCTTAGTCATTATTACCTTGTTATGTGGCTGTGC AACGGCGGCTGCGGGGCCAATAGGGTTTGTCAGCCTAATGATGCCCCACATTGCGAGATGGATGGTCGGTCCAGATCAAC GTTGGATCATTCCGTTTTGCTGCTTACTCACGCCGATTTTGCTGCTTTTTTCAGACATCGTCGGCCGTGTGATCTTAACG AGTGAATTACAGGTGTCTGTCGTGACTGCCTTTGTTGGTGCACCAATCTTGATTTACTTAGCGCGTAAAAAAAGCGCAAG CCAGCTGTGA Protein sequence : MQASDSSLVNSVRIQGHVSLTRKKRLFWLTASIAVLLIAMVVSLAIGSRPISVSTIIQILQGRDLGLDSAIIWEGRIPRT LNGLFVGMALGVSGALIQAITRNPLADPGILGVNVGASLAIAIGIVFLGVTTLWEFFIFSSVGALVTSLLVYAIGQTKGR PDPLKLTLAGVAIGAVLGGISSGLTLFNPNAFDAVRFWVVGSLDARTLDIPLFIAPVVTLGCLGAFALTPSLNAMGLGEA LASTLGTHIVKVQAASLVIITLLCGCATAAAGPIGFVSLMMPHIARWMVGPDQRWIIPFCCLLTPILLLFSDIVGRVILT SELQVSVVTAFVGAPILIYLARKKSASQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 5e-40 | 41 |
| fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 5e-40 | 41 |
| fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 5e-40 | 41 |
| fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 5e-40 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Marme_2832 | YP_004313891.1 | ABC transporter permease | VFG0926 | Protein | 1e-51 | 48 |
