Gene Information

Name : Marme_2817 (Marme_2817)
Accession : YP_004313876.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 3088749 - 3089390 bp
Length : 642 bp
Strand : -
Note : KEGG: mmw:Mmwyl1_3242 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; transcripti

DNA sequence : 
GTGCACAAGATACTCATAGTGGATGACCACGATTTAGTGTGTGAAGGATTAAAACGAGTTTTGCAGGATGCGCCAAACTT
GGTAGTGATTGGCGTAGCTCATAGTGGAGAAGAGGCCCTTGAGTTTATACGTGAAGAACAACCAAACATCGTGTTGATGG
ATGTTCATATGCCAGGCATCGGTGGACTAGGAGCGACTGTGGAAATTACACGTCGTTATCCCTCTATTAAGATCGTTGCC
CTGTCAGCGATGGACGACAACCCGTACCCAACCAAGTTGATTGAAGCGGGAGCAAGTGGTTACGTCACCAAAGGCGCTGA
ATCACTAGAGCTTTTGGATGCAATTGATACTGTATCGAAAGGTGAGCGTTACATTTCTAAGAGTGTTGCGCAGAAAATTG
CACTTGCAAAAACCTCTTCGATAGATGGTGACTCGCCGTTACACGCCTTGTCTGAAAGAGAGCTACAAGTCGCTCAAATG
ATCGTGGATTGTAAAAAATCCAACGAAATTGCCGATCAATTGAATGTCAGCCCTAAAACGGTCAGTACGTACCGAGCTCG
CATTTTCTCTAAACTTAACATTGAAAGTGATGTTGAGCTGGCTCGATTAGCGATGCGCTATAACATACTCGGTCTAGGTT
AA

Protein sequence : 
MHKILIVDDHDLVCEGLKRVLQDAPNLVVIGVAHSGEEALEFIREEQPNIVLMDVHMPGIGGLGATVEITRRYPSIKIVA
LSAMDDNPYPTKLIEAGASGYVTKGAESLELLDAIDTVSKGERYISKSVAQKIALAKTSSIDGDSPLHALSERELQVAQM
IVDCKKSNEIADQLNVSPKTVSTYRARIFSKLNIESDVELARLAMRYNILGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-46 49
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-46 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_2817 YP_004313876.1 LuxR family transcriptional regulator VFG1889 Protein 2e-40 44