Gene Information

Name : Marme_1639 (Marme_1639)
Accession : YP_004312738.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 1824919 - 1826661 bp
Length : 1743 bp
Strand : -
Note : KEGG: pat:Patl_3456 type III restriction enzyme, res subunit; PFAM: Restriction endonuclease, type I, R subunit/type III, Res subunit; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal

DNA sequence :
ATGTATAAATTACGTAACTACCAACAAGACGCTGTCGACGCGACCCTCGAACACTTTCGCCAGAGTGACGACAGCGCTGT
TATTGTATTACCAACAGGGGCAGGAAAAAGTTTAGTCATTGCAGAATTGGGCCTCCTCGCTAGAGGCAACGTTGTTTGCC
TTGCTCATGTAAAAGAGCTGGTCGATCAAAATCACAGTAAACTGGCCGCCTTAGGCGTTGAAACGGGTATTTTTTCCGCT
GGTTTAGGACAACGACAACTCAATAAAAAAACAACATTCGCCAGCGTACAAAGTCTCGCCCCCAACCTAGGCCTGTTTAA
TGACGCGATCAGTCTCTTAATTGTCGACGAATGCCACCGGATTTCAGAAGACGATGAAAGCCAATATCAAAAAGTCATAC
AGCATTTTAAACAATTGAACCCACGCGTTCGAATACTCGGACTGACCGCGACGCCGTATCGTCTCGACGCAGGCTGGATA
TACAAACGACACCACTGGGGCTTTTTCAGAGATGCACCCAAAGCATTCTTTGAAAAGTGCATTTATGAACTGCCACTGCG
CCGTTTAGTGAATGATGGCTACCTAACGAAACTGATTGTCTACGATGCGGCAGTCGAACAATACGATTTTAGTGCCTTAA
CCGAATCATTAGACGGTGAGACAGACACGAGCGATTTATCCTTAAACAAACTCGTGTCTAAACATCCGCGCGTCACCAAA
GCAATCTGTGAACAAATCTTAGAGCTCAGTCAAAGTCGACAAGGGGTGATGATTTTTGCGTCAACACGAGACCACGCAAA
CGAAATCATCGGCTACCTTCCCGTCGAAGAGTCCGCTTTAGTGACAGGAGACACTCCCACTAAAGAACGCGATGAGATTA
TCATCGCATTTAAAAACAAGCGGCTTAAATATCTCGTTAACGTGTCGGTTCTAACCACAGGTTTCGATGCTCCCCATGTT
GATGTCATTGCCTTGCTACGGCCAACCGAATCGGTCAGTTTATATCAACAAATTGTCGGGCGAGGACTGCGACTGAGTGA
CAACAAAAAGGACTGCCTAATTCTGGATTACACCAACCAAGGTTATGACCTTTATCAACCAGAAATAGGCACGAAAAAGC
CAAATCCAAACGTAAAACTGGTTCAAGTAGCCTGCCCTCAGTGTGACTTTCAAAACATGTTTTGGGGACAACAAAGCAAA
GACGGCGATGTGCTTGAGCACTACGGCCGCCGATGTCAGGCGATCATTGAAACACCTGACGATGAGCAGCAATGCAGTTA
TCGGTTTGTCTTTAAACGCTGCCCAAATTGCAACGAAGAAAATGACATAGCTGCACGCAAATGTTTGCACTGTAACCATA
AACTGATCGACCCAGACGACACACTTAGAAAGGCACTGAGCTTAAAAGACAATAAAGTACTGAGGTGTCAGGCGATTACT
GCAAAAATAGACGGAACAAAGCTACATATCACCTATCATGATGAAGACGGTGAAACACTCAAAGAACAGTTTGATTTCTC
GGTAAAAAAACACTTAAAACGCTTTAACGACGAGTTTAGCCGAAGACTCGGAAACGGAGCGGTCCCCGTTTCATTTAGCA
CTATTGATGAGATAAAGCGCTTCCTAGATTATCTACCAAGTCCTGATTTCGTTATTGCAAAAAAACAGAAGGGTAATTAT
TGGCAAGTGACGGAAAGGCTGTTTGATTACGACGGCCCTTATCGACGAGCAAACGAGCTCTAG

Protein sequence :
MYKLRNYQQDAVDATLEHFRQSDDSAVIVLPTGAGKSLVIAELGLLARGNVVCLAHVKELVDQNHSKLAALGVETGIFSA
GLGQRQLNKKTTFASVQSLAPNLGLFNDAISLLIVDECHRISEDDESQYQKVIQHFKQLNPRVRILGLTATPYRLDAGWI
YKRHHWGFFRDAPKAFFEKCIYELPLRRLVNDGYLTKLIVYDAAVEQYDFSALTESLDGETDTSDLSLNKLVSKHPRVTK
AICEQILELSQSRQGVMIFASTRDHANEIIGYLPVEESALVTGDTPTKERDEIIIAFKNKRLKYLVNVSVLTTGFDAPHV
DVIALLRPTESVSLYQQIVGRGLRLSDNKKDCLILDYTNQGYDLYQPEIGTKKPNPNVKLVQVACPQCDFQNMFWGQQSK
DGDVLEHYGRRCQAIIETPDDEQQCSYRFVFKRCPNCNEENDIAARKCLHCNHKLIDPDDTLRKALSLKDNKVLRCQAIT
AKIDGTKLHITYHDEDGETLKEQFDFSVKKHLKRFNDEFSRRLGNGAVPVSFSTIDEIKRFLDYLPSPDFVIAKKQKGNY
WQVTERLFDYDGPYRRANEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01052 YP_001437156.1 hypothetical protein Not tested Not named Protein 2e-154 55