Gene Information

Name : Marme_1591 (Marme_1591)
Accession : YP_004312691.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter subunit DctM
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 1776948 - 1778213 bp
Length : 1266 bp
Strand : -
Note : KEGG: mmw:Mmwyl1_3116 TRAP dicarboxylate transporter subunit DctM; TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transporter permease DctM subunit

DNA sequence : 
ATGCCAACCGCTATTGTTACTCTCCTGTTTTCATTTATTGCCTTGTCTGTTCCGATCGCGGTAGCGATCGTACTTGCTTG
CGCCATCGGCCTGTACTTTTTTAGCAACCTTCCCTTGATCATCATTCCACAACGCATGTTCTCAGGGTTAGACAGCTTCC
CATTAATGGCCGTACCGCTGTTCATTCTTGCGGGAAACATAATGGGACAAGGCGGTGTGTCAAAGCGCCTCGTCACTTTT
GCAAAATCTCTGGTGGGTAACATACAGGGCGGCTTGGCGATGGCATGTGTCATTACCAGTATGATCTTCGCTGCGGTGTC
CGGCTCCAGTGTCGCAACAACCTACGCGGTCGGTGCCATTCTGTTACCCGCTATGATTCGCCACGGTTACCCCAAACCCA
TGGCAACGGCGATACAAGCCTCGTCAGCAAACCTTGGGATCATCATCCCCCCTTCTGTTCCGTTAATCATGTACGGGATC
AGTACCAACACATCAATAGGTAAACTGTTTCTTGCAGCCATTGGTCCAGGGTTATTGATGGGCGCAGCACTTATCGCCAT
GGTCGTTATTTGGTGCCTAGTAACCGGTCAGGGCAAACACGATTCGGTTGATCGACAAAACCTCCTGACCTCATCAAAAG
ACGCGATACTCGCGCTGCTCATGCCCACATTGATACTCGGTGGAATCTACGGCGGTATCTTCACACCGACCGAGGCTTCT
GCCATCGCCGTTATTTATGGTCTTTTCTTAGGCGTATTCGTTTATAAAGAAATCACCTTCAAGGACATACCCAAAATCCT
TAAAGGCTCTGTGATCTCGACTACTTCGGTTATGTTGATCATTGCCGCTGCCTCTTTGCTGAGCTTTTTAGTCAGTCGCT
CTGACTTACCACAAACCTTATCCGCCTACGCCAGTGACACGTTCACCACCAAATTGCAGTTTCTAATGGCGGTTAACTTA
TTGCTTCTTTTAGTTGGCATGTTTGTCGAAACATCCGCTTCAATTTTATTGCTCGCGCCGATCCTCACACCAATCGCCAT
TATGTTTGGTATCGATCCCGTGCACTTTGGTATCGTTATGGTCGTAAACTTGGCCATCGGAATGTTCACGCCACCGCTTG
GTGTCACGCTCTTTGCAGCAAGCCAAGTTGCCGATATAGCAGTTGAAAAGGTCATATTGTCGACGCTCGTACCTTTGGGC
ACTTTGCTCTGTTGCTTGCTTATCATTACAATATTTCCTGAACTCACCCTTTTTTGGGTAAAATAG

Protein sequence : 
MPTAIVTLLFSFIALSVPIAVAIVLACAIGLYFFSNLPLIIIPQRMFSGLDSFPLMAVPLFILAGNIMGQGGVSKRLVTF
AKSLVGNIQGGLAMACVITSMIFAAVSGSSVATTYAVGAILLPAMIRHGYPKPMATAIQASSANLGIIIPPSVPLIMYGI
STNTSIGKLFLAAIGPGLLMGAALIAMVVIWCLVTGQGKHDSVDRQNLLTSSKDAILALLMPTLILGGIYGGIFTPTEAS
AIAVIYGLFLGVFVYKEITFKDIPKILKGSVISTTSVMLIIAAASLLSFLVSRSDLPQTLSAYASDTFTTKLQFLMAVNL
LLLLVGMFVETSASILLLAPILTPIAIMFGIDPVHFGIVMVVNLAIGMFTPPLGVTLFAASQVADIAVEKVILSTLVPLG
TLLCCLLIITIFPELTLFWVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 3e-51 42
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 3e-51 42
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 3e-51 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_1591 YP_004312691.1 TRAP dicarboxylate transporter subunit DctM VFG1110 Protein 1e-51 42