Gene Information

Name : Marme_1435 (Marme_1435)
Accession : YP_004312538.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 1603680 - 1604456 bp
Length : 777 bp
Strand : +
Note : PFAM: ABC transporter-like; KEGG: mmw:Mmwyl1_0690 ABC transporter-like protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGTCGATTCATTTTCAAAATGTTCAATTGGGCTACAAAGGCCATCGCGTTATAGAGGATGTCACGTTAACCATACCGGA
TGGTAAAATTACGGCGCTGCTTGGGCCGAATGGCTGTGGTAAGTCGACCTTGTTGAAATCCATTTCTCGAATCATCACAC
CGACTCATGGCTCAGTCAATTGGAATAGGCAAGATATCGCGTCACTTTCTCCTAAGTATCTCGCCACTCAAATCGCACTG
CTTCCTCAAACTCAGCCTATTCCTGAAGCGATTCTCGTAAGGGAATTAGTCTCGTATGGACGAAGTCCTTATACTGGTTT
TTGGGGCAAGCTTCAGCGTAAAGACGCGGATATTGTGAATGATGTTATGAAGCAGGTTGGCGTATTTGAGTTAAAAGATA
GATATGTCTCGGATTTGTCTGGCGGCCAGCGTCAGCGTGTGTGGTTGGCAATGGTGCTCGCACAAGACACGCCTTATGTT
TTGCTTGATGAACCCACTACTTATATGGATATCAATCATCAAGTTGAATTAATGGCCATTTTGCAGGAATTAAATAAGCA
AGGTAAAACTGTTGTTACGGTTCTGCATGATATCAACCAAGCTGCTCGGTATTGTGACCACCTCGTTATTATGAAAGCTG
GAGCGCTTTTGTATCAAGGCGCTCCGAGTGAGGTGATTACCGAGGATATGCTAAAGCGAGTATTTCAAGTTCAAGCACAG
GTTCACCTTGATCCTATTGCCAATACGCCGATGTGCATTGTTGAAGATCGAGTTTAG

Protein sequence : 
MSIHFQNVQLGYKGHRVIEDVTLTIPDGKITALLGPNGCGKSTLLKSISRIITPTHGSVNWNRQDIASLSPKYLATQIAL
LPQTQPIPEAILVRELVSYGRSPYTGFWGKLQRKDADIVNDVMKQVGVFELKDRYVSDLSGGQRQRVWLAMVLAQDTPYV
LLDEPTTYMDINHQVELMAILQELNKQGKTVVTVLHDINQAARYCDHLVIMKAGALLYQGAPSEVITEDMLKRVFQVQAQ
VHLDPIANTPMCIVEDRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-67 53
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-50 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-50 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-50 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-50 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-50 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-50 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-48 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-50 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-48 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_1435 YP_004312538.1 iron-chelate-transporting ATPase BAC0164 Protein 4e-67 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_1435 YP_004312538.1 iron-chelate-transporting ATPase VFG1042 Protein 3e-67 53
Marme_1435 YP_004312538.1 iron-chelate-transporting ATPase VFG0925 Protein 2e-51 45