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Name : Marme_1351 (Marme_1351) Accession : YP_004312460.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1510324 - 1511622 bp Length : 1299 bp Strand : + Note : PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase, class IIa; KEGG: mmw:Mmwyl1_3252 seryl-tRNA synthetase DNA sequence : ATGTTAGACATTAAAGCACTCCGTACAGACCCAGACGCGATCGCGGCTAAACTAAAAAAGAAAGGGTTTGAATTAGATGT TGCTGCGTTCTCATCGCTTGAGGAACGTCGCAAAGCAATTCAAGTCGAAACGGAGAACCTGCAACAGTCCCGTAACTCAG TATCAAAACAAATCGGTCAGGCAATGAAGTCTGGCGACAAAGCGAAGGCGGATGAGCTAAAAGCACAAACGGCGACTTTG GGCGATGACCTAACAAAAGCAAAAGAAGCGCTAAACCAAGTTCAAACCGATTTGGAGCTGTTGCTAGAAGGTATCCCTAA CATTCCTCATGAGTCTGTTCCTGAAGGTGTTTCAGAGGACGACAATATAGAAATTCGTCGCTGGGGTGAGCCTCGTACAT TTGACTTCGAGGCAAAAGATCATGTCGACCTAGGGGAAGCGCTAGGCGGCTTAGATTTTGAGTTAGCGGTAAAAATCACA GGTTCTCGTTTTGCTGTAATGCGCGCGGATCTAGCTCGTCTTCATCGTGCGTTAACACAGTTTATGATTAACACGCATGC GGATGAGCATGGTTACTCTGAAGTATATGTTCCCTATTTGGTGAATGCGCATTCACTGAAGGGCACTGGACAATTACCTA AGTTCGAAAAAGACTTGTTTAAAGTGCCAGTTGATAAAGACAGCGGCAACAGTGATTTGTACTTGATTCCTACTGCGGAA GTTCCTGTCACTAATATCGCACGTGATGAAATCTTTAATGATTCAGATCTGCATCATAAGTACGTGGCGCACACGCCATG TTTTCGTAGTGAAGCGGGCAGTTATGGCCGTGACACGCGCGGTATGATCCGTCAACACCAATTTGAAAAGGTGGAGTTGG TGCATATTTGTCGCCCTGATCGCTCAACAGAGATTCTTGAAGAGTTGGTTGGTCACGCAGAAACGATCCTGCAAAAACTG GGATTACCGTATCGAACTGTTATTTTATGCGGCGGTGATTTAGGCTTCTCTGCTCATAAAACATATGACATTGAAGTATG GTTGCCAGGCCAAGGTAAGTACCGAGAAATTTCTTCTTGTTCTAACATGTGGGATTTCCAAGCGCGCCGTATGCAAGCTC GTTGGCGTAACCCTGAAACAGGTAAGCCAGAATTAGCGCATACGCTAAATGGATCTGGTTTAGCGGTTGGACGTACTCTG GTCGCTGTGCTTGAGAATTATCAAAATGAAGATGGCAGTATCGATATTCCAGATGTACTTGTGCCATACATGGGTGGTAA AACCAAGCTTGGTGGATGA Protein sequence : MLDIKALRTDPDAIAAKLKKKGFELDVAAFSSLEERRKAIQVETENLQQSRNSVSKQIGQAMKSGDKAKADELKAQTATL GDDLTKAKEALNQVQTDLELLLEGIPNIPHESVPEGVSEDDNIEIRRWGEPRTFDFEAKDHVDLGEALGGLDFELAVKIT GSRFAVMRADLARLHRALTQFMINTHADEHGYSEVYVPYLVNAHSLKGTGQLPKFEKDLFKVPVDKDSGNSDLYLIPTAE VPVTNIARDEIFNDSDLHHKYVAHTPCFRSEAGSYGRDTRGMIRQHQFEKVELVHICRPDRSTEILEELVGHAETILQKL GLPYRTVILCGGDLGFSAHKTYDIEVWLPGQGKYREISSCSNMWDFQARRMQARWRNPETGKPELAHTLNGSGLAVGRTL VAVLENYQNEDGSIDIPDVLVPYMGGKTKLGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-100 | 53 |
