Gene Information

Name : Marme_1264 (Marme_1264)
Accession : YP_004312373.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Unknown
Product : transposase IS4 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3039
EC number : -
Position : 1405375 - 1406310 bp
Length : 936 bp
Strand : +
Note : PFAM: transposase, IS4-like; KEGG: vcj:VCD_000992 IS5 transposase

DNA sequence :
ATGAACCAACTCTCCTTCGCAGATACCGAATTCACCAGTAAACGCCGTAAAACCCGCAAAGAGCTTTTTCTGGGTCGAAT
GGGTGAGTTGATTCCATGGCAAAAACTCGAAGCTCAAATAGTGCCCTTTTACCCGAAAGCAGGTAACGGGCGACGTCCTT
ACCCGCTTGCGACCATGTTACGCATTCACTTTATGCAAAACTGGTACAACATGAGTGATCCCGCGATGGAAGATGCTCGG
TATGAGATAACCTCTATGCGTTTATTTTCAGGATTGTCTTTAGAGGGTGCCATTCCTGATCACACAACCATCATGAACTT
CCGCCATTTGCTTGAGAAGCATAAGATTGGTCGTAAGCTCTTTAAAGAAGTGAATAAATGGTTGTCTGATTCAGGAATCC
ATTTCAAGGAAGGAACCATCGTTGACGCGACGATTATTGAAGCTGCAAGCTCAACCAAAAATAAATCGAATGCGCGTGAT
CCTGAAATGCATCAAACCAAAAAGGGAAATCAATGGTTCTTTGGATTAAAAGCACATATTGGTGTCGATGCAAAACGAGG
CTTAGTGCATAGCTTTACTACTACACCCGCCAATGATCGTGATCTAAACCAAATCCATGAGCTCATACATGGCGACGAGT
CATTTGTGTCGGCCGACTCAGGCTACCGTGGTGTAGAAAAACGAGAGGAAACTAAAGGAAAGAAGCTGGATTGGTTGATT
GCTGAAATGCCCAGTAAGATACGTGCTTGGAAGAAACGTCCTCGTATAAATAAGAACCCCATCCGAACAGAGTATTTAAA
GGCCAGTATCAGAGCCAAAGTCGAGCACCCGTTTAGAATACTAAAATGCCAGTTTGGCTTCCGAAAAGTCGTCTACAAAG
GCTTGTCGAAGAATGACAACAAGCTTGCCGTCTTGATACGATCTGCACGGGGTTAG

Protein sequence :
MNQLSFADTEFTSKRRKTRKELFLGRMGELIPWQKLEAQIVPFYPKAGNGRRPYPLATMLRIHFMQNWYNMSDPAMEDAR
YEITSMRLFSGLSLEGAIPDHTTIMNFRHLLEKHKIGRKLFKEVNKWLSDSGIHFKEGTIVDATIIEAASSTKNKSNARD
PEMHQTKKGNQWFFGLKAHIGVDAKRGLVHSFTTTPANDRDLNQIHELIHGDESFVSADSGYRGVEKREETKGKKLDWLI
AEMPSKIRAWKKRPRINKNPIRTEYLKASIRAKVEHPFRILKCQFGFRKVVYKGLSKNDNKLAVLIRSARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 7e-79 54
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 1e-64 54
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 1e-64 54
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 7e-73 51
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 7e-73 51
unnamed AAO33449.1 putative transposase Not tested Not named Protein 1e-52 49