Gene Information

Name : Marme_1132 (Marme_1132)
Accession : YP_004312243.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1269715 - 1270212 bp
Length : 498 bp
Strand : +
Note : KEGG: mmw:Mmwyl1_1262 redoxin domain-containing protein; HAMAP: thiol peroxidase Tpx; PFAM: Redoxin

DNA sequence : 
ATGGCTGTTGTTACTTTAAAGGGTAATGAGTTTGAAACCGTTGGTGAGTTGCCTACCGTTGGCACGCAGGCTCCTCAGTT
TGAGCTGGTGAAAACAGACTTATCAACAGCAACTTTGACAGATTATGCTGGCAAAAAAGTTGTTTTAAATATTTTTCCTT
CAGTTGATACTCCAACTTGCGCAACGTCTGTACGTAAGTTTAATGAAACAGCTGCTTCATTAGAGAATACTATTGTAGTA
TGTGTTTCTGCAGATCTACCGTTTGCTGCAGCACGTTTTTGTGGTGCTGAAGGTCTAGACAGTGTTGAAACTGGTTCTAC
TTTCCGTTCAACATTTGGCGAAGATTACGGCCTTGTATTCACAACAGGACCGCTTGCGGGTTTACTGTCTCGTGCTGTTG
TTGTGCTTGATGAATCAGGTAATGTCTTATTTACTGAACAAGTTGCAGAAACGGCTGATGAGCCTAATTATGAAGCTGCG
CTAGAAGCACTAAAGTAG

Protein sequence : 
MAVVTLKGNEFETVGELPTVGTQAPQFELVKTDLSTATLTDYAGKKVVLNIFPSVDTPTCATSVRKFNETAASLENTIVV
CVSADLPFAAARFCGAEGLDSVETGSTFRSTFGEDYGLVFTTGPLAGLLSRAVVVLDESGNVLFTEQVAETADEPNYEAA
LEALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-28 41
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 6e-29 41
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 8e-29 41
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 4e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_1132 YP_004312243.1 thiol peroxidase VFG0087 Protein 2e-29 41