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Name : Marme_1087 (Marme_1087) Accession : YP_004312198.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Virulence Product : YscJ/HrcJ family type III secretion apparatus lipoprotein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 1218033 - 1218830 bp Length : 798 bp Strand : + Note : KEGG: eay:EAM_2885 type III secretion system protein; TIGRFAM: type III secretion system lipoprotein HrcJ/YscJ; PFAM: Secretory protein YscJ/FliF DNA sequence : ATGGTCTTATCACTTAAACGATTATCGTGCCTTTTGCTTTTACTGCTTATCAGCGGGTGTCAGCAAGATATTGAACTGCA TAAGAAATTGAGCGAAGAAGATGCGAATGAAGTGATTGCCGAACTTGCTTCTCGACACATAGAAGCTGAGAAAAAAGCGA CTAAAGAGGGGGTGACCGTTTTAGTCGAAGCCTCCAGCATGGCGCGTGCAGTCAGAATATTGGAAGCGGCAGGCTTGCCA CGAAAACCGCGAGCGAATTTCGGTGAAGTCTTTAAAAAAGAAGGGGTTATCTCGTCACCTTTAGAAGAGCGCGCACGTTA TATCTATGCCTTGTCACAAGAGCTGGAGTCGACAATATCGCAAATAGACGGCATATTGATTGCTCGAGTTCACGTCGTAT TGCCTGAACGAATTGCGCCCGGCGAAGCCGTGCAACCAGCCTCTTCCGCTGTTTTTATAAAGCATCGTCCTGATCTAGAT CCCGATGTCATTCGACCTCGCATAGAAAGGTTGGTCCGTACCAGTATACCGGGGTTATCTGAAAAGCCCGATAAGTTGAG CGTTGTGTTTGTCGTGACGAAAGCGTATCAGGAGCAACAGCAACTTGTGAGAGTAGGGCCGTTTCTAATGGATGCTTCTG ATCTATGGGTCTGGCGCAGTGCCATTATCGGTGTGTCTATCCTGTTTGTCCTATTGCTTTTCGCCAGTGCTTTTGCAATC AAGCCAGACCTTAAAACCATGATATTTAACCGAGCGCCGAAATTAGATAAGGGTGCTCATGACGGTACGCCACCATGA Protein sequence : MVLSLKRLSCLLLLLLISGCQQDIELHKKLSEEDANEVIAELASRHIEAEKKATKEGVTVLVEASSMARAVRILEAAGLP RKPRANFGEVFKKEGVISSPLEERARYIYALSQELESTISQIDGILIARVHVVLPERIAPGEAVQPASSAVFIKHRPDLD PDVIRPRIERLVRTSIPGLSEKPDKLSVVFVVTKAYQEQQQLVRVGPFLMDASDLWVWRSAIIGVSILFVLLLFASAFAI KPDLKTMIFNRAPKLDKGAHDGTPP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcJ | AAT96359.1 | HrcJ | Virulence | S-PAI | Protein | 2e-57 | 65 |
| hrcJ | AAT96279.1 | HrcJ | Virulence | S-PAI | Protein | 2e-57 | 65 |
| hrcJ | AAT96320.1 | HrcJ | Virulence | S-PAI | Protein | 2e-57 | 65 |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 7e-62 | 64 |
| hrcJ | ABA47308.1 | HrcJ | Virulence | S-PAI | Protein | 5e-57 | 61 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 8e-59 | 61 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 8e-58 | 61 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 2e-56 | 60 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 2e-56 | 60 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 4e-57 | 59 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 3e-57 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Marme_1087 | YP_004312198.1 | YscJ/HrcJ family type III secretion apparatus lipoprotein | VFG0409 | Protein | 6e-26 | 41 |
