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Name : Marme_1079 (Marme_1079) Accession : YP_004312190.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Virulence Product : HrcV family type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 1209015 - 1211114 bp Length : 2100 bp Strand : - Note : KEGG: pct:PC1_2206 type III secretion protein, HrcV family; TIGRFAM: type III secretion protein HrcV; PFAM: type III secretion system FHIPEP DNA sequence : ATGAATAAACTCTTTATTCTATTAAATACATTTGCCATCACCATGATGAAGCGATCCGAAATCGTCGGTGCGGTGTTCGT TCTCGCCATTGTATTTATGATGATTATCCCGATGCCAACCGGCTTGGTAGACTTTCTGATCGCACTCAACATCAGTCTGT CCTCCCTCTTAATCGCGTTGGCTATGTATTTACCGAGCCCTTTAGCGTTTTCATCGTTCCCCGCGGTACTGCTACTGACC ACTATGTTTCGCTTGGCGCTTTCTATATCAACAACACGTTTGATTCTGCTCGAACAAGATGCTGGGGATATTGTCGAAGC GTTTGGTAATTTCGTTGTGGGTGGCAACCTTGCTGTTGGTCTCGTCATCTTTTTAATCCTGACCGTTGTAAATTTTCTGG TTATCACAAAAGGATCTGAACGCGTCGCGGAAGTAGCCGCGCGATTTACCTTAGACGCCATGCCCGGCAAGCAAATGTCG ATCGACAGCGATCTACGTGCTGGTTTACTCGCCCCTCAAGAAGCACGCTTTAAACGCGAACAATTAGGCAAGGAAAGCCA ACTGTTTGGCGCAATGGACGGGGCGATGAAATTTGTAAAAGGCGATGCGATTGCCGGACTTATTATTGTCTTTATTAACC TGATCGGTGGCTTTTCAATTGGGACGCTTCAGCATGACATGAGCGCGTCTGAGTCAATGCACCTTTACTCCGTCCTTACT ATCGGCGACGGCCTCATTGCACAAATTCCAGCCCTACTTATTTCATTAACGGCGGGCATGATCATTACCCGTGTTGCGCC AGACAACCAAGAGATCGACGCCAATATTGGGCGTGAAATGGCACAGCAAATTAGCAGCCAACCCAAGGCTTGGATCATTG CGGCTTGTGGGCTGCTCGGCTTCGCTATTCTCCCTGGAATGCCAACCGTTAGCTTTCTTTCTCTGGCCATCGTATTTTTG CTCTGTGGTGGTTTTCAGCTTTATAAAGCAATGAAGATTAGGCAGTTCCAACAACAAGAATCAGACCAAACCGCGACGCC TGCGGAAAATGGCGATGAAGATCTAAGAAGGTTTAACCCATCACGCCCCTATCTTCTACTTTTTAATCCGATACGTAGCA CGCCTAATGATCCCTTTACGGTACAACTGATCAGAGAAGCACGCCGCTGCCGAAATCGAATCGTAGACACTTTCGGCATT ACCTTACCATCGTTTGATATTGATTATGACGCAACACTGGGTGAAGATGAGTTCTGCTTCTGCGTGTACGAAGTGCCTTA TATTCGTGCTACCTATACGCCCGACTTAATTGCACTGAATGCGTCAGAGCTTACCGAAGAAGAGCTGGGGAAAGAGGACT TTAAAGACAGGCGTACAGGCAGCCCCGAACGTGAAGAAGAACGATGGCTTTGGATTCCGTCAACTAGCCCACTGACGCAA AATGAATCCTATACTTTTACACTGCCCATTCGACTTATTCTAGAACGCTTGGAACGTGCTTTTTTCGCGACAGGGCCGCA ATTTATTGGCCTGCAAGAAGCAAAAACCTTTGTCAGTTGGATCGAGATGGAACAGCCAGAGCTAGCACAAGAATTACAGC GCATCGTCCCAACATCGCGATTTGCTTCTGTTCTAAAGCGTCTAGCAGCGGAAAGCGTGCCATTAAGAGCGATACGCCCC ATTGCAGAAGCGTTAATCGAGCACGGGCAGTATGAGCGCGATACCGGCGCATTAACCGACTTTGTCAGAATCAGCTTAAA AGCTCAAATATGCCATCAATACACATCAGATCAAGGGATGCATGTTTGGCTTCTAACCCCTGAGGCAGAAGAAACACTTA GAGACTCATTGAGGCAAACTCAAACAGAGTCCTTCTTTGCCCTGTCTCGCGAAGCAAACCAAAGTTTAGTCGAGCAACTT AGAGACGCTTTTCCAATTTTAGCCACTCCTATTCCTGTTTTACTCGTTGCTCAAGATTTACGTCGAATACTACGAAATTT ATTACAGGATGAGTTTAACCACATTCCAGTGTTATCCTTTACTGAGTTGCAATCCACTTCTCATGTGAATGTTTTAGGAC ATATATCGTTAGATGGCTAA Protein sequence : MNKLFILLNTFAITMMKRSEIVGAVFVLAIVFMMIIPMPTGLVDFLIALNISLSSLLIALAMYLPSPLAFSSFPAVLLLT TMFRLALSISTTRLILLEQDAGDIVEAFGNFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVAARFTLDAMPGKQMS IDSDLRAGLLAPQEARFKREQLGKESQLFGAMDGAMKFVKGDAIAGLIIVFINLIGGFSIGTLQHDMSASESMHLYSVLT IGDGLIAQIPALLISLTAGMIITRVAPDNQEIDANIGREMAQQISSQPKAWIIAACGLLGFAILPGMPTVSFLSLAIVFL LCGGFQLYKAMKIRQFQQQESDQTATPAENGDEDLRRFNPSRPYLLLFNPIRSTPNDPFTVQLIREARRCRNRIVDTFGI TLPSFDIDYDATLGEDEFCFCVYEVPYIRATYTPDLIALNASELTEEELGKEDFKDRRTGSPEREEERWLWIPSTSPLTQ NESYTFTLPIRLILERLERAFFATGPQFIGLQEAKTFVSWIEMEQPELAQELQRIVPTSRFASVLKRLAAESVPLRAIRP IAEALIEHGQYERDTGALTDFVRISLKAQICHQYTSDQGMHVWLLTPEAEETLRDSLRQTQTESFFALSREANQSLVEQL RDAFPILATPIPVLLVAQDLRRILRNLLQDEFNHIPVLSFTELQSTSHVNVLGHISLDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | AAT96256.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 65 |
| hrcV | AAT96337.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 65 |
| hrcV | AAT96297.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 65 |
| hrcV | ABA47273.1 | HrcV | Virulence | S-PAI | Protein | 0.0 | 64 |
| hrcV | AAB05999.2 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 64 |
| hrcV | AAT96139.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 62 |
| hrcV | AAT96193.1 | HrcV | Virulence | T-PAI | Protein | 0.0 | 62 |
| hrcV | NP_791229.1 | type III secretion protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 61 |
| hrcV | AAR25631.1 | type III secretion protein HrcV | Not tested | Not named | Protein | 0.0 | 61 |
| hrcV | ABQ88352.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 60 |
| hrpI | AAA03015.1 | HrpI | Virulence | Hrp PAI | Protein | 0.0 | 60 |
| hrcV | AAG33877.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 60 |
| YPO0266 | YP_002345347.1 | secretion system apparatus protein SsaV | Virulence | Not named | Protein | 3e-101 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Marme_1079 | YP_004312190.1 | HrcV family type III secretion protein | VFG0064 | Protein | 9e-119 | 44 |
| Marme_1079 | YP_004312190.1 | HrcV family type III secretion protein | VFG0384 | Protein | 1e-118 | 42 |
| Marme_1079 | YP_004312190.1 | HrcV family type III secretion protein | VFG0198 | Protein | 4e-99 | 41 |
