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Name : Marme_1068 (Marme_1068) Accession : YP_004312179.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Virulence Product : type III secretion protein, YscU/HrpY family Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 1200244 - 1201350 bp Length : 1107 bp Strand : - Note : KEGG: dze:Dd1591_1882 type III secretion protein, YscU/HrpY family; TIGRFAM: type III secretion protein HrpY/HrcU; PFAM: type III secretion exporter DNA sequence : ATGAGTGAAAAAACGGAAAAAGCGACCCCCAAAAAAATAAAAGATTCACGTAAAAAAGGTCAAGTGGGGCAGAGCCAAGA CATCCATAAGCTAATGATTTTAGGCGTTCTGTTAGAAGTCGTTTTAGGCATGGTGGATTCCGGTGTTCGAAATCTAGAAA AGCTCACTTCAATACCGCTCTCGATGATCAATCAACCGTTTCAATATGCACTTCAAGCAACCGTCGTGAATTGCCTAACC ATTGCCGCGTCGATGGTCATGATGGCATTAGGAATCGCAGTATTGTTTCGGTTATTAGGAGGCTGGCTCCAGTTTGGCTT CTTAATAGCACCAGAAGCGCTCAAAATAGATTTCAACCGCTTAAATCCATTTAGCCAGTTAAAAAATATGTTTTCTGGCA AGAAGCTCTTCGAACTATTCAATAGCTTCATCAAAGCAATCACGATTGGCGTTGTGATGTATTTTATTTTGACGCCTATC TTGCCGTCATTGGGTAAATTGGCATTAACAGATTTAGATACAACATGGCGCGGAATAGCAGAACTGTTTCTAAAAGTAGA GCGTGCGTGCGTGGGAGTGCTCATTGTGATTGCTTCTATTGATTTTGGCATGCAGAAGTATTTCCATTTTAAAAGCCTAA AAATGAGTAAGGATGATGTTAAGCAGGAATATAAAAACCAAGAAGGTGACCCTCATTTAAAAGGACAACGAAAATCGGAA GCCGTGCGTTTAGCTACCGAAGAACCTTCTCCAGCTCCCTCCGCTAAGCCTGAACTTGGCGAGGCCGATACTTTAGTCGT TAATCCAACTCACTTTGCGGTGGCCTTATATTACCGCTCAGAGGAGACGCCGCTGCCTAAGATTCTAACAAAAGGACAAG ATCAAGATGCACTAGATCTTATTGAACAAGCCAAAGAAAAAGGCATCCCTGTCATACGTTTTATATGGCTCGCTAGGACG CTTTATAAAGAACAGGAAGGTCACTATATCCCCAGAACAACGCTGCGTTATGTGGCAAAGATCTATCAGGTATTGGGAGA ACTAGATCGGGATACGGTCAAAATGGAAGACGGTGTGTTAAGAATACCCGATTTAGAAAGCCAGTAG Protein sequence : MSEKTEKATPKKIKDSRKKGQVGQSQDIHKLMILGVLLEVVLGMVDSGVRNLEKLTSIPLSMINQPFQYALQATVVNCLT IAASMVMMALGIAVLFRLLGGWLQFGFLIAPEALKIDFNRLNPFSQLKNMFSGKKLFELFNSFIKAITIGVVMYFILTPI LPSLGKLALTDLDTTWRGIAELFLKVERACVGVLIVIASIDFGMQKYFHFKSLKMSKDDVKQEYKNQEGDPHLKGQRKSE AVRLATEEPSPAPSAKPELGEADTLVVNPTHFAVALYYRSEETPLPKILTKGQDQDALDLIEQAKEKGIPVIRFIWLART LYKEQEGHYIPRTTLRYVAKIYQVLGELDRDTVKMEDGVLRIPDLESQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | ABA47282.1 | HrcU | Virulence | S-PAI | Protein | 2e-81 | 52 |
| hrcU | AAT96265.1 | HrcU | Virulence | S-PAI | Protein | 3e-78 | 52 |
| hrcU | AAT96346.1 | HrcU | Virulence | S-PAI | Protein | 6e-76 | 52 |
| hrcU | AAT96306.1 | HrcU | Virulence | S-PAI | Protein | 3e-78 | 52 |
| hrcU | NP_791219.1 | type III secretion protein HrcU | Virulence | Hrp PAI | Protein | 2e-73 | 50 |
| hrcU | AAT96149.1 | HrcU | Virulence | T-PAI | Protein | 4e-75 | 50 |
| hrcU | AAT96203.1 | HrcU | Virulence | T-PAI | Protein | 4e-75 | 50 |
| hrcU | ABQ88362.1 | HrcU | Virulence | Hrp PAI | Protein | 1e-75 | 50 |
| hrpY | AAB05078.1 | HrpY | Virulence | Hrp PAI | Protein | 1e-75 | 50 |
| hrcU | AAB06008.1 | HrcU | Virulence | Hrp PAI | Protein | 1e-78 | 50 |
| hrcU | AAG33887.1 | HrcU | Virulence | Hrp PAI | Protein | 6e-63 | 47 |
| hrcU | AAC35808.1 | hrp type III pathway protein | Virulence | Hrp PAI | Protein | 6e-64 | 46 |
