Gene Information

Name : Marme_1053 (Marme_1053)
Accession : YP_004312164.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1180561 - 1181601 bp
Length : 1041 bp
Strand : -
Note : PFAM: Domain of unknown function DUF523; Domain of unknown function DUF1722; KEGG: mmw:Mmwyl1_1153 hypothetical protein

DNA sequence :
ATGATGAAATCACACGATGCAAATTCAAACATATCCAGTGGATCTAACACATCTATTAGACAAAAAGCAGACGCTTTTCG
TCCTGATCACCTTATCGGCAAAATTCCGGTGGGAATTAGTTCATGTTTATTAGGTGATAACGTGAGGTTCAATGGCGGAC
ATTCTCGTTCAACTTACTGCCTTGGACCGCTTAGTGAGTACTTCGAATATAAAAAATTCTGCCCCGAAGTCGCGGCGGGG
TTTGGTACGCCTCGTCCAACACTGCGATTAATTGGCGACCCTAATGCACCCGTGATGACCTATACCAAAGGAACGGGAGA
AGATCTTACAGGTCAATTTAAACAAGCATCGGAGCGGTATCTGGCGACCATGCCAGAACTGGATGGTTACATCGTAATGA
AAAACTCTCCAAGCTGCGGTATAAGTAGAATCAAGGTTTATCAGGAAAATGGGCATCCACATATGGAACGAGTTAGCGGC
TTGTTTACCGACGCATTGATGAGAAAGTTCCCTCTATTACCTGTCGAAGAAGATGGAAGGCTCAACGACCCAGCGCTTCG
TGAGAACTTTATGCTCAGAGTCTTTGCCCATCATGAGTTTCGATTGAGTGTGGCATACGCTCCGACGATGAAAGCCTTAA
TTGATTTCCATAGTCGCTATAAATACCTTGTTATGGCGCACTCTCAACCCGCCTATAAATCTCTAGGAAGGCTGCTATCA
GGCCAAGAAAAATGCGCTATAGAGACTCTGTGTGAGCGCTACTTCTCGGAGTTCATGACTGCGTTGAGCAAACCAGCTAA
ACGCCGTAACCATTGCAATGTATTGATGCATTTAGTGGGTTACCTAAAAAAGGCGGTGGATGCCTCCATACGAAAAGACA
TTTTAGAGGTGATTGAGCAATATCGCCGAGGTGAAGTCTTCTTAACAACGCCCATGACTATTTTGCATCACTACTTAAAG
CAGTACGGTAGCGACTATGTGAAACATCAACGTTATTTCGAACCTTACCCTAAAGCCCTCGGAATCCGAAACAGCGTTTA
A

Protein sequence :
MMKSHDANSNISSGSNTSIRQKADAFRPDHLIGKIPVGISSCLLGDNVRFNGGHSRSTYCLGPLSEYFEYKKFCPEVAAG
FGTPRPTLRLIGDPNAPVMTYTKGTGEDLTGQFKQASERYLATMPELDGYIVMKNSPSCGISRIKVYQENGHPHMERVSG
LFTDALMRKFPLLPVEEDGRLNDPALRENFMLRVFAHHEFRLSVAYAPTMKALIDFHSRYKYLVMAHSQPAYKSLGRLLS
GQEKCAIETLCERYFSEFMTALSKPAKRRNHCNVLMHLVGYLKKAVDASIRKDILEVIEQYRRGEVFLTTPMTILHHYLK
QYGSDYVKHQRYFEPYPKALGIRNSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 6e-68 43
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 3e-68 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 4e-68 43
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 6e-68 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 6e-68 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marme_1053 YP_004312164.1 hypothetical protein VFG0490 Protein 2e-68 43