Gene Information

Name : Marme_1045 (Marme_1045)
Accession : YP_004312156.1
Strain : Marinomonas mediterranea MMB-1
Genome accession: NC_015276
Putative virulence/resistance : Unknown
Product : glycine/betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : 3.6.3.32
Position : 1170534 - 1171727 bp
Length : 1194 bp
Strand : -
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: glycine betaine/L-proline transport ATP-binding subunit; KEGG: ppr:PBPRB1788 glycine betaine ABC transporter ATP-binding protein; PFAM: ABC transporter-like

DNA sequence :
ATGGATAATTCAACGTCTCCACTTATTGAAATAGAATCGCTTTATCAGATATTTGGCTCATCGCCAAAAAGCGTACTGCC
TAAAGTAAAGCAAGGTATGAGCAAAAGTGATGTTCTTGCTGAGACTGGCCACACTGTTGGACTTCGAGACATCAACCTTT
CTGTGAAGCGTGGCGAAATTTTCGTCATTATGGGGCTGTCTGGCTCTGGTAAATCCACGCTTATTCGTCACTTTAATCGA
TTGATCGATCCTACTGCCGGAAAGATAAAAGTCGAAGGCGACGACATACTGACGCTCTCCGCGAAGGATTTAGTTGAATT
TCGCCGACATAAAATGTCAATGGTTTTTCAACACTTCGGCCTGATGCCCCACCGTTGTGTGTTAGATAATGTTGGCTACG
GATTATCCATTAAAGGCGAAAAGCGTGAAAGTTGGTCCGAGAAAGCCAAAGAATGGTTAGAAACAGTGGGTCTGGAAGGG
TACGAAGACCAATATCCTTCTCAGCTATCTGGTGGACAACAACAACGCGTCGGCCTAGCTCGCGCCTTATGTACCGATGC
CGAAATTCTATTAATGGATGAAGCGTTTTCCGCGCTCGACCCATTAATTCGTTACGACATGCAAAGCCAATTAATCGAGC
TACAAAAACGGCTACACAAAACGATTGTATTCATCACACATGACTTAGATGAAGCATTGCGTTTAGGCGACCGTATCGCC
GTTCTAAAAGATGGCGAAATGGTACAAGTAGGCACGCCTGAAGACATCATTTTGAACCCAATTGACGATTACGTAAGAGA
CTTTGCCAAAGACGTAAACCGAGCAAAAGCCTTGAAAGTGAGTCATGTCATGAACACACAAGGGCAAGATGTTATCGACT
GTCATTCCGCAGACGATTTGAAAGCACACCTTACATCCGCTGAAGATAGCACCATTATTTGGACCAAAGACAATGAACTC
CAAGGCGTCGTAACGCCAAATAGTTTTGCGACCTTTGAAAGCGGCTTATCGAAAACGCCCCTGCTCCATACACACAGTGT
TGGTGAACAGGACTACCTTCAGGATGTGCTGCCTATCGCCCTTTCTACTAGCAACAGTGCCATACCAGTGCTCAACGCAG
AAAGCCAAGTTGCAGGCACTCTGACTCATTTAGAGCTTGCGAACGCTCTCAGTCCAAAAGAGCTGGAAGCCTAG

Protein sequence :
MDNSTSPLIEIESLYQIFGSSPKSVLPKVKQGMSKSDVLAETGHTVGLRDINLSVKRGEIFVIMGLSGSGKSTLIRHFNR
LIDPTAGKIKVEGDDILTLSAKDLVEFRRHKMSMVFQHFGLMPHRCVLDNVGYGLSIKGEKRESWSEKAKEWLETVGLEG
YEDQYPSQLSGGQQQRVGLARALCTDAEILLMDEAFSALDPLIRYDMQSQLIELQKRLHKTIVFITHDLDEALRLGDRIA
VLKDGEMVQVGTPEDIILNPIDDYVRDFAKDVNRAKALKVSHVMNTQGQDVIDCHSADDLKAHLTSAEDSTIIWTKDNEL
QGVVTPNSFATFESGLSKTPLLHTHSVGEQDYLQDVLPIALSTSNSAIPVLNAESQVAGTLTHLELANALSPKELEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 3e-80 44