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Name : Marme_0999 (Marme_0999) Accession : YP_004312110.1 Strain : Marinomonas mediterranea MMB-1 Genome accession: NC_015276 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1124051 - 1125553 bp Length : 1503 bp Strand : + Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase, class II; KEGG: mmw:Mmwyl1_1132 lysyl-tRNA synthetase DNA sequence : ATGTCGAACGAAACGAACACAGAAAATGCGTTGGCGAGTGAAGATAACCGTTTGGTTGCTGAGCGCCGTGCGAAATTGGC GGCAATCCGTGAAGAGCGCATAGCCTTTCCAAACGCCTTTCGCCGAGATGCATATGCGGCTGACCTTCAAGCTGAGCTAG GACAATTCGAAAAGGCTGAACTTGAAGAAAAGGACCATAAAGTTTCTATTGCTGGTCGTATCGTTCGAAATCGTGGTGCT TTCATGTTGCTTCAAGACATGACTGGACAGATTCAGGCTTATGTTAACCGAAAAGCGTTGAGCCCTGAGCTGCTAGCTGA GCAAAAAACATGGGATCTAGGGGACATTATTGGTATCTCTGGCCCGGTTCATAAGTCCGGAAAAGGGGACTTATACATTG ATATGCAGAAGGCTGAGTTGTTGACCAAATCTTTGCGTCCATTGCCTGATAAGCATAAAGGCTTAGCAGACATGGAAATG CGCTACCGTCAGCGTTATGTCGATTTGATTGTAAATCAAGAGTCTCGCACTACGTTTGAAGTGCGCTCTAAAATTATTTC TACTATTCGCCGATTCTTAGAAGATCGTCGTTTCATGGAAGTAGAAACGCCTATGCTGCAAACGATTCCGGGTGGTGCAA CGGCACGTCCTTTCGTGACTCACCACAATGCGATGGATATGCAAATGTACATGCGTATCGCGCCTGAACTGTATTTGAAG CGTTTGGTTGTTGGTGGCTTTGAGCGAGTATTTGAAATTAACCGTAACTTCCGTAACGAAGGTGTTTCTACTCGCCATAA TCCTGAATTCACTATGATCGAATTTTACCAAGCCTATGCGGACTATAACGATCTAATGGATCTGACGGAAGATATGCTTC GTACCGTATCAGAGAAGGTTCTAGGTACAACGAATGTTACTTACCAAGGTCAAGAATTTGATTTCGGTGCACCATTTGCA CGTATGACGATGCTTGAGTCAATTCTGCATTTCAACCCAGAATTAACAGTAGAAGACCTTGATACACTTGAAAAGGCAAC GGCGGTTGCTAAGAAGCTACACATTGATGTGAAGCCTATTTGGGGATTGGGTAAACTTTGGACTGAAATTTTTGAAGAAA CGGCTGAAAGCAAATTGATTCAACCGACTTTCATCACAGAATACCCAGCGGAAGTATCTCCACTAGCTCGTCGTAACGAT GACAATGAATTTATTACTGACCGCTTTGAGTTTTTTGTCGGTGGACGTGAAATTGCCAATGGCTTCTCTGAGCTTAATGA TCCAGAAGATCAGGCGGAGCGATTCCGTCGTCAAGTTGAGGAAAAAGACGCCGGTGACGACGAAGCGATGCACTATGATG CAGACTACATCAATGCGCTAGAGTACGGTCTTCCACCGACTGCTGGCGAAGGCATTGGTATTGACCGTCTTGTCATGTTG TTTACGGATTCTCCTTCAATCAGAGATGTGTTGTTGTTCCCTCATATGAAGCCTCAAGACTAA Protein sequence : MSNETNTENALASEDNRLVAERRAKLAAIREERIAFPNAFRRDAYAADLQAELGQFEKAELEEKDHKVSIAGRIVRNRGA FMLLQDMTGQIQAYVNRKALSPELLAEQKTWDLGDIIGISGPVHKSGKGDLYIDMQKAELLTKSLRPLPDKHKGLADMEM RYRQRYVDLIVNQESRTTFEVRSKIISTIRRFLEDRRFMEVETPMLQTIPGGATARPFVTHHNAMDMQMYMRIAPELYLK RLVVGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYNDLMDLTEDMLRTVSEKVLGTTNVTYQGQEFDFGAPFA RMTMLESILHFNPELTVEDLDTLEKATAVAKKLHIDVKPIWGLGKLWTEIFEETAESKLIQPTFITEYPAEVSPLARRND DNEFITDRFEFFVGGREIANGFSELNDPEDQAERFRRQVEEKDAGDDEAMHYDADYINALEYGLPPTAGEGIGIDRLVML FTDSPSIRDVLLFPHMKPQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-143 | 58 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-84 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Marme_0999 | YP_004312110.1 | Lysyl-tRNA synthetase | VFG1668 | Protein | 2e-143 | 58 |
