Gene Information

Name : Clole_0764 (Clole_0764)
Accession : YP_004307695.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Unknown
Product : oligo-1,6-glucosidase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : 3.2.1.10
Position : 949717 - 951366 bp
Length : 1650 bp
Strand : +
Note : PFAM: glycosyl hydrolase, family 13, catalytic domain; KEGG: bcy:Bcer98_0354 alpha amylase catalytic region; SMART: glycosyl hydrolase, family 13, subfamily, catalytic domain

DNA sequence :
ATGAATTGGAGAAAAGAGGCCGTAGGCTATCAAATTTATCCTAGAAGTTTTATGGATTCAAATGGTGATGGCATTGGTGA
TTTACAAGGCATCATTTCTAAATTAGATTATATAAAAGACTTAGGGATTGACGTGATTTGGATTTGTCCTATGTATGAAT
CACCTAACGACGATAATGGTTATGATATTAGTAACTATCAAGGCATTATGAAAGAATTTGGAACCATGGCTGATTTTGAT
GAACTTTTAAGAAAGGTTCATGAAAAAGGTATGAAGCTTATTATTGATCTAGTACTTAATCATACATCAGATGAACATCC
TTGGTTCCTAGAATCAAGAGCGTCTAAAGAAAGTAATAAAAGAGATTGGTACATCTGGAGAGAAGGCAAAGAAGGCAAAG
AGCCTAACAACTGGGAAAGTATTTTCCATGGCTCAGCTTGGGAATATGATGAAGCGACAGATGAGTATTTTCTTCATTTA
TTTAGTAGAAAACAACCAGACTTAAATTGGGAGAATAAGGAAGTTAGACATGCACTATATGCAATGGTTAATTGGTGGCT
AGATAAAGGAATAGATGGCTTTAGAATAGATGCTATTAGCCATATTAAGAAAGAACCAGGTTTATTAGATATGCCCAATC
CAGAAGGACTTCAATATGTTTCATCGTTCGATAAGCATATGAATATAGAAGGAATTCATGATTTTTTAGAGGAGTTAAAT
AAAGAAACTTTTTCTAAATATGACATTATGACGGTAGGAGAAGCTAATGGCGTAAATGCCGAGGAAGCTAAGCTATGGGT
AGGAGAAAAGAATGGCAAGTTCGATATGGTTTTCCAATTTGAACATCTTGATTTATGGGATACTGAAGGGGAGCAGAAGC
TAGATGTGTTAGCTTTAAAGAAAGTACTTAGTCGTTGGCAAAACTCTCTTTATAAAGAAGGCTGGAATGCTCTCTTTATA
GAAAATCATGATATTGTAAGGGTTGTTTCTAAATGGGGAGATGATGAGAAATATTGGGCAGAAAGTAGTAAAGCTTTAGC
TATGATGTACTTTATGCAACAAGGGACACCTTTTATTTATCAAGGACAAGAAATTGGGATGACAAATGTTCATTATCCAG
AAATCTTCTATTATAACGATATTGCAACCTATAATCGTTATATTAAAAATAGAGAAGAAGGCATGTTAAAAGAAGTGGCT
TTAAAGCATGAGTGGGCAGCTTCAAGAGATAATGCTAGAACACCTATGCAGTGGGATGGTAGTGAAAAAGGCGGGTTTAC
CACAGGAGAACCTTGGCTTGCAATAAATCCTAATGTAAAAGCTATTAATGTAGCAAATCAATTAGAGGACTCACAATCTA
TTTTAAACTTTTATAAAGACTTGATTCGTATTAGAAAAGCAAATTCTACTTTTATAGAAGGAAAGTATGAGTTAGTCATG
CCAGAAGACACTCAGCTTTACGCTTATACAAGAACAGATGATCATGGCAAGTTCCTTATTATTTGTAATCTAACAGGTGA
AGAAGCTCAGTTTACGGCTGACTTTGATTTAGAAGATAGAGAATTACTTTTAAGCAATTATGAAATTCAGCAAGAGCATC
AGCTGGAAGTAATAAGACCTTATGAAGCAAGACTATATTGTTTAAGCTAG

Protein sequence :
MNWRKEAVGYQIYPRSFMDSNGDGIGDLQGIISKLDYIKDLGIDVIWICPMYESPNDDNGYDISNYQGIMKEFGTMADFD
ELLRKVHEKGMKLIIDLVLNHTSDEHPWFLESRASKESNKRDWYIWREGKEGKEPNNWESIFHGSAWEYDEATDEYFLHL
FSRKQPDLNWENKEVRHALYAMVNWWLDKGIDGFRIDAISHIKKEPGLLDMPNPEGLQYVSSFDKHMNIEGIHDFLEELN
KETFSKYDIMTVGEANGVNAEEAKLWVGEKNGKFDMVFQFEHLDLWDTEGEQKLDVLALKKVLSRWQNSLYKEGWNALFI
ENHDIVRVVSKWGDDEKYWAESSKALAMMYFMQQGTPFIYQGQEIGMTNVHYPEIFYYNDIATYNRYIKNREEGMLKEVA
LKHEWAASRDNARTPMQWDGSEKGGFTTGEPWLAINPNVKAINVANQLEDSQSILNFYKDLIRIRKANSTFIEGKYELVM
PEDTQLYAYTRTDDHGKFLIICNLTGEEAQFTADFDLEDRELLLSNYEIQQEHQLEVIRPYEARLYCLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 5e-118 48