Gene Information

Name : Clole_0477 (Clole_0477)
Accession : YP_004307416.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 589991 - 590869 bp
Length : 879 bp
Strand : +
Note : KEGG: cce:Ccel_1858 pyridoxal biosynthesis lyase PdxS; TIGRFAM: Vitamin B6 biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
ATGAGTGATAGATTAGAGCTTAATAAGAATTTAGCCCAAATGCTAAAGGGCGGCGTTATTATGGATGTTGTTAATGCTAA
GGAAGCTATTATTGCAGAGAAAGCTGGAGCTGTAGCGGTTATGGCTTTAGAAAGAGTCCCTTCAGATATTCGTAAACATG
GTGGAGTTGCCAGAATGTCTGATCCTAAGATGATTAAGGAGATTCAAGCTGCTGTTAGTATTCCAGTTATGGCGAAAGTG
CGTATTGGACATTTTGTAGAAGCACAAATTTTAGAGTGTTTAGAGATTGATTATATTGATGAAAGTGAAGTATTAACACC
TGCAGATGAAGATTATCACATTAATAAGCATGATTTTAAAGTGCCTTTTGTATGCGGTGCACGTAACTTAGGAGAAGCAC
TTCGTCGTATTGGAGAAGGCGCCTCTATGATTCGTACAAAGGGAGAAGCAGGGACAGGAAATGTCGTTGAAGCTGTTAGA
CATATGCGTACCATGAATAGAGATATCGCAAGAGTTGTAGGAGCTACCAAAGAAGAACTAATGACTATTGCCAAAGAATT
AGGTGCACCTTATGAACTTATTTTAACCATTAAAGAAACTGGTAAATTGCCAGTAGTTAACTTTGCAGCAGGTGGAATAG
CTACACCAGCAGATGCAGCACTTATGATGCAATTAGGTGCAGATGGTGTGTTCGTAGGGTCTGGTATTTTTAAATCTGAG
AATCCACAGAAAAGAGCAGAAGCCATTGTTAAAGCAACAACTTACTACAATGATCCAAATGTATTAGCTGAGGTATCAGA
AGAATTAGGTGAAGCCATGGATTCATTAGATATAAGACAGTTAGATGACAAGCAGCTTTATGCATCAAGGGGATGGTAG

Protein sequence : 
MSDRLELNKNLAQMLKGGVIMDVVNAKEAIIAEKAGAVAVMALERVPSDIRKHGGVARMSDPKMIKEIQAAVSIPVMAKV
RIGHFVEAQILECLEIDYIDESEVLTPADEDYHINKHDFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVR
HMRTMNRDIARVVGATKEELMTIAKELGAPYELILTIKETGKLPVVNFAAGGIATPADAALMMQLGADGVFVGSGIFKSE
NPQKRAEAIVKATTYYNDPNVLAEVSEELGEAMDSLDIRQLDDKQLYASRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-76 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-76 66
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-76 65