Gene Information

Name : Clole_3811 (Clole_3811)
Accession : YP_004310689.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Virulence
Product : teichoic-acid-transporting AtPase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : 3.6.3.40
Position : 4171258 - 4172007 bp
Length : 750 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: aha:AHA_2899 RfbE, O-antigen export system ATP-binding protein RfbE; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGAAAAAATGCCATATATCTATTAAAGAAGTCTACTTAGATTATCCATCTACTATTTATAATAGAAAAACACTCAAGCA
AGCTATATTTGAAATGGCTAGGCTTCAAAAACCAGCTAAACTACTTAATGATGTACATGCATTGAGAGGAGTATCTATTG
AAATAAATGAAGGTGAAAAGGTAGGGATAATAGGACACAATGGTGCAGGTAAAAGTACATTACTTAAAGCTATTGCAGGA
ATTTATCCTACTACAGGGGGAGAAATAGAGATAGAGGGGAAGATACGAAGTTTATTTGATCTAGCAGTAGGATTTGAAAT
TGATGCAACAGGGAGAGAAAATATCTTATATAGAGGACTATTATTAGGAGAAACACCTAGGAGTATTAAAGAAAAGACAG
AATCAATTATTGAGTTTGCAGAACTAGGAGAATTTATTGATTATCCCATCAAGTCCTATTCATCTGGGATGATTGTAAGA
CTTGCTTTTGCTATTTCTACTATGATTGATGGAGACATTTTACTTTTAGATGAAATATTTGGAGCAGGAGATGCTCGTTT
TATGAATAAAGCTAAACAACGTATTATGGGGCTTATTGAAAATGCAAAAATTCTAGTATTTGTATCTCATGATTTTGCAG
CAATTAAAGAATTATGTGACCGAGTTATTTGGCTTGATCATGGAACTGTAAGAATGGATGGAGATCCAGATTATGTTATT
AGTGAATATCTAAAGGTGATGAGTATTTAA

Protein sequence : 
MKKCHISIKEVYLDYPSTIYNRKTLKQAIFEMARLQKPAKLLNDVHALRGVSIEINEGEKVGIIGHNGAGKSTLLKAIAG
IYPTTGGEIEIEGKIRSLFDLAVGFEIDATGRENILYRGLLLGETPRSIKEKTESIIEFAELGEFIDYPIKSYSSGMIVR
LAFAISTMIDGDILLLDEIFGAGDARFMNKAKQRIMGLIENAKILVFVSHDFAAIKELCDRVIWLDHGTVRMDGDPDYVI
SEYLKVMSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clole_3811 YP_004310689.1 teichoic-acid-transporting AtPase VFG2228 Protein 3e-65 54
Clole_3811 YP_004310689.1 teichoic-acid-transporting AtPase VFG1449 Protein 6e-23 42