Gene Information

Name : Clole_3656 (Clole_3656)
Accession : YP_004310537.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3986711 - 3987616 bp
Length : 906 bp
Strand : -
Note : KEGG: cdf:CD3421 porphobilinogen deaminase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; PFAM: porphobilinogen deaminase, N-terminal; porphobilinogen deaminase, C-terminal domain

DNA sequence : 
ATGAAAGTAGTTATAGGAACAAGGGGAAGTAGACTAGCACTTACTCAAACAAAGTGGGTCATTGATGAATTAGAAAAGCA
TTACCCAGAGCTTGCTTGTGAAATGAAGATTATTAAAACAAAGGGTGACCTTATTCAAGATAAACCACTAGACAAAATAG
GAGATAAAGGTATTTTTACTAAGGAAATCGAAGCTGAGCTATTAAAAGGGAATATTGATATGGCTGTGCATAGTATGAAA
GATATGCCATCGGAATTACCTTTAGGATTAAGATTCACTAGAACACTAAAAAGAGAAGATGCAAGAGATGTACTCATCTT
AAAAGAGGGATACGCTAGTATAGAAGATTTGCCTATAGGTGCAACCATTGCAACAGGCAGCAAAAGGAGAAAGTATCAAC
TACTTGCTTATAGATCAGATTTAAATATAGTACCAATTAGAGGAAATGTAGATACGCGTCTTTGTAAATTAGAGGAAGAG
AAGTTAGAAGGTATTGTTCTGGCAGCGGCTGGGCTTCACCGATTAGGTCTTGCCGATAAAATCACCTGCTATTTGCCTAT
GGAAATCATGCTTCCTGCACCTGCACAAGGCGCATTGGCTATAGAAATAAGACAAGAGGATACAAAGGCGTATGACTTAG
TCAAGGTTTTAGAAGACCCTGTTAGTAGCATACAGGTTGAGGCAGAACGGGCTTTTATGGATGCTATTAATGGAGGATGT
CATATGCCTATAGGTGCGTATTGTGAAGTTATAGGTACAAAACTTCGAATGAGAGGCTTGTTAGGGGATGAGTTAGGTAA
GAAACTTGTGATTAAGGAACTTTGTGCGCCAATAGGAAGTGAAAAGCAGTTAGGAGAAGAGTTAGCGAGTGTATTAAGAA
AGGAATTTGAGAAAAATGACTGGTAA

Protein sequence : 
MKVVIGTRGSRLALTQTKWVIDELEKHYPELACEMKIIKTKGDLIQDKPLDKIGDKGIFTKEIEAELLKGNIDMAVHSMK
DMPSELPLGLRFTRTLKREDARDVLILKEGYASIEDLPIGATIATGSKRRKYQLLAYRSDLNIVPIRGNVDTRLCKLEEE
KLEGIVLAAAGLHRLGLADKITCYLPMEIMLPAPAQGALAIEIRQEDTKAYDLVKVLEDPVSSIQVEAERAFMDAINGGC
HMPIGAYCEVIGTKLRMRGLLGDELGKKLVIKELCAPIGSEKQLGEELASVLRKEFEKNDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-42 44
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-42 44