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Name : Clole_3374 (Clole_3374) Accession : YP_004310262.1 Strain : Clostridium lentocellum DSM 5427 Genome accession: NC_015275 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 3670185 - 3671714 bp Length : 1530 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: lysyl-tRNA synthetase, class II; HAMAP: lysyl-tRNA synthetase, class II; KEGG: cpy:Cphy_3556 lysyl-tRNA synthetase DNA sequence : GTGTCTGATCAAAATCAAGTACAAGAACAAGTACAAGAAAACGTTAGCGAATTAATTAAAGTAAGATATGACAAACTTGC AGGTCTTCAAGAAAAAGGGAAAGATCCTTTCAAAATTACTAAGTTTGATGTAACAGCACATAGTGAAAGTGCTAAAGCAC ACTTTGAAAGCATCGAAAGTACCTTAGAAGAACATGAGATGTCAGAGAAAACTCATTTATCAGTAGCTGGTCGTATTATG GCTAAACGTGATATGGGTAAAGCATCTTTCATTACCATTCAAGATCAAGAAGGACGTATTCAGTCTTATGTTAGAAAAGA TGAATTAGGCGATGAAGATTATGCAGATTTCAAGAAATATGATATTGGTGATATCGTAGGTATTGAGGGCTATATCTTTA GAACACAAAAAGGTGAGATTTCTGTACGTGCAAAATCTGTAACACTTTTATCTAAGAGTTTACAAATATTGCCTGAAAAA TATCATGGTCTTAAAGATACAGAGATGAGATATCGTCAACGTTACGTAGACCTTATTGTGAATCCTGAAGTTAAAGATAC TTTCTTAAAACGTAGTGCTATCATTCGTTCAATGAGAAACTTCTTAGATAACAAAGACTTTATCGAAGTGGAAACACCTG TACTTCACTCAATTGCAGGTGGAGCAGCTGCACGTCCATTTGTGACACACCACAATGCCTTAGATATTGATATGTATATG AGAATTGCACCAGAACTTAAGTTAAAACGCTTAATCGTAGGTGGTTTTGATCGCGTTTATGAAATCGGTAGGGTATTCCG TAACGAGGGTATGTCAATCAGACATAATCCAGAGTTTACAATTATGGAATTATATCAAGCTTTTGCTGATTACAATGATA TGATGGATATTACAGAAGAAATGATTAGACACGTATGCAAAGAAGTCAATGGAACAGCAGTTATTGAGTATGATGGCGTA ACAATCGACCTTGACAAACCATTTGCTAGAATTTCTATGGTAGATGCTGTTAAACAATATACAGGAGTAGACTTTAGAGC AATTAAAGATCTTGAAGAAGCTAGAGCTATTGCTAAAGAAAAACATGTTGCTTTTGAAGAACATCATATGAAAGGTGATA TCCTTAACTTATTCTTTGAGGAATTTGTTGAAGAACACCTTATTCAGCCAACCTTCTTAACAGAACATCCAGTAGAAATT TCTCCTCTTTCTAAACGTAAACCATTAGACCCAGAGTACACAGAAAGATTTGAACTTTTCATCGTTGGGCGTGAACATGC TAATGCATTCTCTGAGCTTAATGATCCAATCGACCAAAGAGGTCGTTTCAAACGTCAAGAAGAGCTTAGAGCAGCTGGCG ATGATGAAGCTTGTGAAATTGATGAAGACTTCTTAACAGCTTTAGAATACGGCTTACCACCAACAGGTGGCCTTGGAGTT GGTGTGGACAGACTTGTGATGCTCCTTACTAACTCAGCATCTATTAGAGATGTATTATTATTCCCAACTATGAAACCAAT TAGTGAATAA Protein sequence : MSDQNQVQEQVQENVSELIKVRYDKLAGLQEKGKDPFKITKFDVTAHSESAKAHFESIESTLEEHEMSEKTHLSVAGRIM AKRDMGKASFITIQDQEGRIQSYVRKDELGDEDYADFKKYDIGDIVGIEGYIFRTQKGEISVRAKSVTLLSKSLQILPEK YHGLKDTEMRYRQRYVDLIVNPEVKDTFLKRSAIIRSMRNFLDNKDFIEVETPVLHSIAGGAAARPFVTHHNALDIDMYM RIAPELKLKRLIVGGFDRVYEIGRVFRNEGMSIRHNPEFTIMELYQAFADYNDMMDITEEMIRHVCKEVNGTAVIEYDGV TIDLDKPFARISMVDAVKQYTGVDFRAIKDLEEARAIAKEKHVAFEEHHMKGDILNLFFEEFVEEHLIQPTFLTEHPVEI SPLSKRKPLDPEYTERFELFIVGREHANAFSELNDPIDQRGRFKRQEELRAAGDDEACEIDEDFLTALEYGLPPTGGLGV GVDRLVMLLTNSASIRDVLLFPTMKPISE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-108 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clole_3374 | YP_004310262.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-108 | 53 |
