Gene Information

Name : Clole_3210 (Clole_3210)
Accession : YP_004310102.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 3482903 - 3483691 bp
Length : 789 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: amt:Amet_3771 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGGAAGCAATTGAAGTAAGCAAGTTACAAGTGGCTTATGAGCACAAGTTAATTATTGCAAATATGAATCTTAAAATTCC
TATGGGGAAAATCACTATGATTATTGGTGCTAATGGTTGTGGTAAATCTACGCTATTAAAAACCATTGCACGTATTATTT
CACCTAAAAAGGGAGAAATCAAATTAAATGGTATCAATATTCAAAAACAAGCACCAAAAGAAATTGCTAAAAAGATGGCA
GTGCTTCCTCAAAGTCCGATAGTTCCTTCCGGCCTTTTAGTAAAAGAATTAGTATCTTATGGAAGATTTCCTTATCAAAA
TGCTATGGGGGGAATGAAACAAGAAGATGTTGAGAAAGTCAATTGGGCAATGGAAGTTACAGGTGTTTTAGAGTTTGCCA
ATCGCTCAGTAGATAGCTTGTCAGGTGGACAAAGGCAACGTGCTTGGATTGCCATGGCACTCGCACAAGAAACAGAAATT
CTAGTATTAGATGAACCAACCACATACTTAGATATGGCGCATCAGTTAGAAATACTAGAGCTACTACAAACCTTAAATAA
GCAGCAAAATAGAACAATTGTTATGGTATTACACGAATTAAATAATGCCACAAAGTTTGCGGATTATATTATTGGCGTCA
AAGAGGGGCAAATCGTATTTGAAGGCAAACCACTTGAAGTGATTACCAAAGAGAATTTATTTGAGCTGTATGGCATTGAG
GCAACACTCCAATTAGATGCAGCAAAACAATACCCAATCTGTGTAGATTTTAATTTAGCAAAGCGCTAA

Protein sequence : 
MEAIEVSKLQVAYEHKLIIANMNLKIPMGKITMIIGANGCGKSTLLKTIARIISPKKGEIKLNGINIQKQAPKEIAKKMA
VLPQSPIVPSGLLVKELVSYGRFPYQNAMGGMKQEDVEKVNWAMEVTGVLEFANRSVDSLSGGQRQRAWIAMALAQETEI
LVLDEPTTYLDMAHQLEILELLQTLNKQQNRTIVMVLHELNNATKFADYIIGVKEGQIVFEGKPLEVITKENLFELYGIE
ATLQLDAAKQYPICVDFNLAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 9e-55 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 9e-55 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-49 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-49 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-49 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-49 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-48 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-48 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-48 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-48 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-52 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clole_3210 YP_004310102.1 iron-chelate-transporting ATPase VFG0925 Protein 9e-51 47