Gene Information

Name : Clole_3051 (Clole_3051)
Accession : YP_004309945.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-ACP reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 3309572 - 3310315 bp
Length : 744 bp
Strand : -
Note : KEGG: cob:COB47_1376 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGCTTAAAGATAAAGTAGCGGTGATTACAGGAAGTGTTCGAGGCATAGGAAGAGCTATTGCTATGTGCTTTGCGAAACA
AGGTGCAAATGTTGTAATTAACTATAGTAGTGAGAAAAGGAAAGAAGAAGCTGATCAAGTTGTAACAGAAATTAAGGCAT
TAGGGGGAAAAGCTATTGCCCTTTGCGCTAATGTAGCCAATAGTGAAGAAGCCAAAGGACTTATTGAAGGAACCATAGCT
GCTTTTGGTAAAATAGATATTTTAGTTAATAATGCAGGTATTACTAAGGATATGTTACTTCTTAGAATGACTGAAAAAGA
GTTCCAAGAGGTATTAGATGTGAATTTAAAAGGTGTTTTCAATTGTTCAAAGCATGGGGCTAAAGCCATGATGAAAACAG
GTGGAAGTATTATTAATATGACTTCAGTAGTTGGCATCAATGGTAATGCCGGACAAAGCAACTATGCAGCCTCCAAGGCG
GGAGTTATTGGATTTACCAAATCAGTAGCTAAAGAATTTGCTGGTAAGAATATTCGTGTAAATGCAATTGCACCAGGTTT
TATTACAACAGATATGACAGATATACTTCCAGAGCGTGTTAAAGAGAGTGTAATGACAAGTATTCCTATGAAATGTTTTG
GAGTGAGTGAAGAAATAGCCAATGTGGCAGTATTTTTAGCAAGTGATCTTTCAAGCTATATTACAGGAGAGGTTATTAAA
GTAGATGGCGGTATGGCCATGTAA

Protein sequence :
MLKDKVAVITGSVRGIGRAIAMCFAKQGANVVINYSSEKRKEEADQVVTEIKALGGKAIALCANVANSEEAKGLIEGTIA
AFGKIDILVNNAGITKDMLLLRMTEKEFQEVLDVNLKGVFNCSKHGAKAMMKTGGSIINMTSVVGINGNAGQSNYAASKA
GVIGFTKSVAKEFAGKNIRVNAIAPGFITTDMTDILPERVKESVMTSIPMKCFGVSEEIANVAVFLASDLSSYITGEVIK
VDGGMAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-38 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-38 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-38 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-38 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 3e-39 41