Gene Information

Name : Clole_2993 (Clole_2993)
Accession : YP_004309888.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3242117 - 3242917 bp
Length : 801 bp
Strand : -
Note : PFAM: Integrase, catalytic core; KEGG: cce:Ccel_2371 integrase catalytic region

DNA sequence :

ATGTATTGGCAAAAGTGCTTTAATAAAGAAAATCCAAACAAAGAAATTGAGGATAAGATTTTAGAAATACATAAAAATAA
TAAGAACTATGGATATAGAAGAATGTGTGGAGAACTTCGGAATCAAGGATATATAGTAAACAAGAAGAAGGTTCAAAGAA
TTATGCAGAAGTTCAACCTTCAGGTTACATCATTTACTAGAAAAAGTCGAAAATACAGTTCCTACAAAGGCAAAGTTGGA
ACTGTCGCACCAAATAGAATTAGAAGACGTTTTAACACGAATATACCTCATCAGAAGATAACAACTGACACAACAGAATT
TAAATATTATGAGATTGATAATAAGGGTCATATGACTACGCATAAGCTTTATTTAGATCCCTTTATGGATATGTGTAGTG
GTGAAATAATAAGCTTTGAAATGGGTAGACAACCATCGGCTCAGAATGTTATGAAGGCTTTAGAAAAAGCAATAGAGATT
ACTTCTGATTGTCCATATCGTAGAACTTTTCATTCAGATCAAGGGTGGGCTTATCAAATGAAAGCCTATTCAAACAGACT
GAAAGAAGAAAAAATATTTCAAAGCATGTCAAGAAAAGGAAACTGTCATGATAATTCAGTAATGGAGAATTTTTTTGGTT
TGCTGAAACAAGAAATCTATTATGGCGTTGTGTATTATAGTTATGAGGAATTAAAATCAGCAATAGAACGATATATAAAG
TATTACAATGAAAAAAGAATAAAGCAAAAACTAGACTGGCTCAGTCCTGTGCAATACAGAATTAGCCTCTTAGCAGCATA
A

Protein sequence :

MYWQKCFNKENPNKEIEDKILEIHKNNKNYGYRRMCGELRNQGYIVNKKKVQRIMQKFNLQVTSFTRKSRKYSSYKGKVG
TVAPNRIRRRFNTNIPHQKITTDTTEFKYYEIDNKGHMTTHKLYLDPFMDMCSGEIISFEMGRQPSAQNVMKALEKAIEI
TSDCPYRRTFHSDQGWAYQMKAYSNRLKEEKIFQSMSRKGNCHDNSVMENFFGLLKQEIYYGVVYYSYEELKSAIERYIK
YYNEKRIKQKLDWLSPVQYRISLLAA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
SEQ_1760	YP_002746996.1	transposase	Not tested	¥ÕSeq3	Protein	4e-37	47
SEQ_0791	YP_002746129.1	transposase	Not tested	¥ÕSeq2	Protein	4e-37	47
EFAU085_00737	YP_008394261.1	ISEnfa3, transposase	Not tested	Not named	Protein	1e-38	41
APECO1_1088	YP_853108.1	transposase subunit	Not tested	PAI IV APEC-O1	Protein	5e-35	41