|
Name : Clole_2895 (Clole_2895) Accession : YP_004309790.1 Strain : Clostridium lentocellum DSM 5427 Genome accession: NC_015275 Putative virulence/resistance : Resistance Product : CopY family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3682 EC number : - Position : 3138598 - 3138981 bp Length : 384 bp Strand : + Note : PFAM: Penicillinase repressor; KEGG: cdl:CDR20291_0413 penicillinase repressor DNA sequence : TTGAATTCAATACCCCAAATTTCTGAAGCCGAATATGAAGTTATGAAAGTCATTTGGAACTATGCACCTATTAGTACCAA TGATGTTATTGATAAACTTTCATCCACTACATCATGGAGTCCTAAGACCATTCAAACCATGCTTCTTCGTTTAGTTAAGA AAAAAGTATTAACTTACGAAAAAAATAGTCGTGTATTTGTTTATACTCCCTTAGTTAGACAAGAAGATTATTTAAATAAG GAAAGCACTTCTTTCCTCAATCGTTTTTATAACGGTGCTTTAAATGCGATGGTTCTTAACTTTTTAGAAAATGATAAACT TTCTCAAGAAGAAATTCACACATTAAAACAGATTTTAAATACAAGAAAAGAGAAAGGAGATTAG Protein sequence : MNSIPQISEAEYEVMKVIWNYAPISTNDVIDKLSSTTSWSPKTIQTMLLRLVKKKVLTYEKNSRVFVYTPLVRQEDYLNK ESTSFLNRFYNGALNAMVLNFLENDKLSQEEIHTLKQILNTRKEKGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mecI | YP_005754043.1 | methicillin resistance regulatory protein MecI | Not tested | Type-XI SCCmec | Protein | 3e-20 | 46 |
| mecI | NP_373280.1 | methicillin resistance regulatory protein | Not tested | Type-II SCCmec | Protein | 3e-19 | 44 |
| mecI | YP_190060.1 | methicillin-resistance regulatory protein MecI | Not tested | Type-II SCCmec | Protein | 3e-19 | 44 |
| mecI | BAA82218.1 | methicillin resistance protein MecI | Not tested | Type-II SCCmec | Protein | 2e-19 | 44 |
| mecI | YP_039517.1 | methicillin resistance regulatory protein MecI | Not tested | Type-II SCCmec | Protein | 7e-17 | 44 |
| mecI | NP_370567.1 | methicillin resistance regulatory protein | Not tested | Type-II SCCmec | Protein | 1e-18 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clole_2895 | YP_004309790.1 | CopY family transcriptional regulator | AM180355.1.gene595.p | Protein | 7e-46 | 73 |
| Clole_2895 | YP_004309790.1 | CopY family transcriptional regulator | FR823292.1.gene6.p01 | Protein | 1e-20 | 46 |
| Clole_2895 | YP_004309790.1 | CopY family transcriptional regulator | NC_002745.1122814.p0 | Protein | 1e-19 | 44 |
| Clole_2895 | YP_004309790.1 | CopY family transcriptional regulator | NC_002952.2861158.p0 | Protein | 2e-17 | 44 |
| Clole_2895 | YP_004309790.1 | CopY family transcriptional regulator | CP001581.1.gene771.p | Protein | 2e-25 | 43 |
| Clole_2895 | YP_004309790.1 | CopY family transcriptional regulator | NC_009782.5560220.p0 | Protein | 4e-19 | 43 |
| Clole_2895 | YP_004309790.1 | CopY family transcriptional regulator | NC_002758.1120003.p0 | Protein | 4e-19 | 43 |
