|
Name : Clole_2894 (Clole_2894) Accession : YP_004309789.1 Strain : Clostridium lentocellum DSM 5427 Genome accession: NC_015275 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 3135018 - 3136148 bp Length : 1131 bp Strand : + Note : PFAM: Integrase, catalytic core; KEGG: cpr:CPR_0967 IS1470, transposase DNA sequence : GTGTTAAGATTGAATCACCACAACACAATCAAACATGAAAAGATAATCACTATGGACTACCCTATTAATACTACAAATCC ACGTAGACATAAACATCTAAACTTCGAAGAACGTATGACAATCCAGATTCGACTAAAAGATGACTTTTCGCCATACAAAA TTGCCAAAGAGTTAGGCCGCGCCTCTAATACAATTCGCAATGAAATCGCAAGATGCACTGTTACACAAATTAAACAAGGT CGTAAAGTACAACTTTATCTCGCAGATGCAGGTGAGCGCATTTACCTTCAACATCGTACACATTGCTGTCCCAAATTCAA ACGCCTATCTTGTAATGATTTCGTATCCTACGTGTGCACAACAATGAAATTGAATAAATGGTCTATAGATGCCTGCGTTG GATATGCTATCCTTAATCAACTTTTCACTCGTTGTGAAATGGTTTGTACAAAGGCGCTCTATAATTACATTGATCTAGGT TTGCTGGAAATCTGTAACGTGAATTTACCTATGAAACTCAGGAGAAATACCAAACCTAAGCGAGTTCGTACGAATAGACG TATTCTGGGTATAAGCATCAAAGAAAGACCAGCTAGTATTGACACTAGAGAAGAATTTGGCCACTGGGAAATAGATACTG TCATCGGTACTAAGGATAAAAATGATAGTGTTCTCCTTACTTTGGCTGAACGAAAAACAAGGCATTATATCGTTCGTAAA ATTGAGTCTAAGACATCTCATACCGTTTTAAAAGAACTATCTAACCTCAAAGAGTACTATGGTAAACAGTTTAATCAAGT CTTTAAAAGTATTACCAGTGATAACGGTCAGGAGTTTGCTCAACTATTTAAAATAGAACAAGAAGCTTCTGTAAAGGTAT ACTTTACCCATCCCTATGCATCATGTGAACGAGGTACTAATGAAAGGCATAACGGGATGTTAAGGCGTTTTCTTCCAAAA GGGGTAGCTATAAATGGATATAGTGCGGATGATATTGCTTTCATTGAGAGCTGGTGTAACACCCTCCCAAGAAAACTCCT CAATTATCATACTCCCAAGGAACTATTCGAAGATGAACTGATATTATTTATGCCGTATAATTTTAGTGGTGAAATAAAAG AGCACAGTTAG Protein sequence : MLRLNHHNTIKHEKIITMDYPINTTNPRRHKHLNFEERMTIQIRLKDDFSPYKIAKELGRASNTIRNEIARCTVTQIKQG RKVQLYLADAGERIYLQHRTHCCPKFKRLSCNDFVSYVCTTMKLNKWSIDACVGYAILNQLFTRCEMVCTKALYNYIDLG LLEICNVNLPMKLRRNTKPKRVRTNRRILGISIKERPASIDTREEFGHWEIDTVIGTKDKNDSVLLTLAERKTRHYIVRK IESKTSHTVLKELSNLKEYYGKQFNQVFKSITSDNGQEFAQLFKIEQEASVKVYFTHPYASCERGTNERHNGMLRRFLPK GVAINGYSADDIAFIESWCNTLPRKLLNYHTPKELFEDELILFMPYNFSGEIKEHS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-97 | 56 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-98 | 56 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-98 | 56 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-98 | 56 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-98 | 56 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-98 | 56 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-98 | 56 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-97 | 56 |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-98 | 56 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-72 | 54 |
