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Name : Clole_0190 (Clole_0190) Accession : YP_004307142.1 Strain : Clostridium lentocellum DSM 5427 Genome accession: NC_015275 Putative virulence/resistance : Unknown Product : glycine/betaine/L-proline ABC transporter ATPase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : 3.6.3.25 Position : 249376 - 250500 bp Length : 1125 bp Strand : + Note : SMART: ATPase, AAA+ type, core; cystathionine beta-synthase, core; TIGRFAM: glycine betaine/L-proline transport ATP-binding subunit; KEGG: cce:Ccel_3334 glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter-like; cystathionine be DNA sequence : ATGATAAAATTTGAAAATGTAACTAAAAAGTTTAAAGATACAAAAGTGCTTTCTGGTATTTCACTAGAAATTGAAAGAGG ACAGCTGGTGGTACTTATCGGAGCCAGTGGTTGCGGGAAGACAACTACGCTTAAGATGATTAATAGGCTTATAAAGCCAA CAACGGGGAAAATTTTGATTGATAATAAAGATATTAGTATGGAAGATGTTATTAAGCTAAGAAGAAATATAGGTTATGTC ATTCAACAAACAGGCTTATTTCCCCATATGACTATCAAGGAGAATATTGAGATTATACCAAGAGTAGAAAGGAAGGATTC GAAAGAAATCACTCAGAAAACTTATGAGTTAATGGAGATGGTGGGTTTAGAGTGTGAAACCTTTTTACATAGATATCCTA CAGAGCTCAGTGGAGGGCAACAACAAAGAGTTGGGGTTGCTAGAGCATTTGCAACAGATCCAGATATTATATTAATGGAT GAGCCTTTTTCTGCATTAGACCCTATTACAAGAAATGGCTTGCAAGATGAGCTTGTACAGTTGCAGTCCAAGCTTCGTAA GACAATCGTGTTCGTAACCCATGATATGGATGAGGCTATTAAGATAGCAGATAAGATTTGTATTATGGATAAAGGTAAAA TTGTACAGTATGATACACCAGAGAATATCCTTAAAAGTCCAGCAAATGATTTTGTATCTGAGTTTGTAGGCAAAAATAGA ATTTGGGCTTCACCTGAGCTTATTAAGGCTCAAGATATCATGCTAGATACACCTGTAACCTGTGATGAAAAGGATACCGT TTTTAGGTGTATAGAGAAGATGAAGTCACGAAAAGTAGATAGCCTCATGGTGATTGATTCAAAGATAAAAACTTTAAAAG GGATTATTAATACTAATCAACTTAGACTTATAAAGGATCAGTCTAGAAGCATTGAGTCCATTGTGAAGACCGACTATTTA TCAATAAATTGCGAAGACAACATGATTGATGTTTTAACAATGATAAATGAAAATAATCTTTCAACCGTTCCTGTGATTAA TCAAGATAAAAAACTTTGTGGTGTGATTACAAGAAGTAGTTTAGTAACAACACTTAGTAGGCAATACATAGAGGAGGGGG AGTAA Protein sequence : MIKFENVTKKFKDTKVLSGISLEIERGQLVVLIGASGCGKTTTLKMINRLIKPTTGKILIDNKDISMEDVIKLRRNIGYV IQQTGLFPHMTIKENIEIIPRVERKDSKEITQKTYELMEMVGLECETFLHRYPTELSGGQQQRVGVARAFATDPDIILMD EPFSALDPITRNGLQDELVQLQSKLRKTIVFVTHDMDEAIKIADKICIMDKGKIVQYDTPENILKSPANDFVSEFVGKNR IWASPELIKAQDIMLDTPVTCDEKDTVFRCIEKMKSRKVDSLMVIDSKIKTLKGIINTNQLRLIKDQSRSIESIVKTDYL SINCEDNMIDVLTMINENNLSTVPVINQDKKLCGVITRSSLVTTLSRQYIEEGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-60 | 49 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-60 | 49 |
