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Name : Clole_2250 (Clole_2250) Accession : YP_004309157.1 Strain : Clostridium lentocellum DSM 5427 Genome accession: NC_015275 Putative virulence/resistance : Unknown Product : transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2474472 - 2475185 bp Length : 714 bp Strand : + Note : KEGG: cpy:Cphy_0742 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduc DNA sequence : ATGAACAAAACATCTATACTCATTGTTGAAGATGAACAAAATATTTGTAATTTCATTGCTACAACTCTTAATGCCCATGA ATATAAAACATTAAGATGTCAAACAGGTAAGGAAGCACTGGCTATTATCCCTTCACACTGTCCAGATCTTATTTTGCTAG ATTTAGGCCTACCTGATATGGATGGGCTAGAGGTATTAACTTCTGTACGCGAATGGTCTTCTACGCCTATTATAGTCATT TCAGCTAGATCACAGGAAGCAGAAAAAGTTCAAGCCCTTGATTTAGGGGCAGACGACTATATTACCAAACCCTTTGGCAC TTCTGAACTTTTAGCAAGAATTCGTACAGCTATTCGCCATAGCTTAAAGATCAGTAAAACCAATCAAGGTGCTAATATTT TCAAAGCTAGTGATTTAACCATTGATTATGATAAGCATATGCTCTTAGTTGGAGATGAAAAAGTTCACCTCACCCAAATT GAGTTCAAGCTCATTTCTCTTTTAGCACAACACGCAGGTAAAGTACTTACTTATGACTATATGATAAAAAAAATCTGGGG GCCATATGCTGGTAGTAATAATCAAATCCTACGTGTTAATATGGCTAATATTCGAAGAAAAATTGAACAAAATCCAGGCG ATCCTAAGTACATTTTTACAGAAGTAGGTATTGGTTACCGTATGATAGAAGAAGAAGGAGAAAGCACACATTAA Protein sequence : MNKTSILIVEDEQNICNFIATTLNAHEYKTLRCQTGKEALAIIPSHCPDLILLDLGLPDMDGLEVLTSVREWSSTPIIVI SARSQEAEKVQALDLGADDYITKPFGTSELLARIRTAIRHSLKISKTNQGANIFKASDLTIDYDKHMLLVGDEKVHLTQI EFKLISLLAQHAGKVLTYDYMIKKIWGPYAGSNNQILRVNMANIRRKIEQNPGDPKYIFTEVGIGYRMIEEEGESTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 4e-45 | 48 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 3e-45 | 48 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-33 | 46 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 4e-32 | 45 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 5e-32 | 45 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 5e-32 | 45 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 5e-32 | 45 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 5e-32 | 45 |
