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Name : Clole_1933 (Clole_1933) Accession : YP_004308850.1 Strain : Clostridium lentocellum DSM 5427 Genome accession: NC_015275 Putative virulence/resistance : Unknown Product : cyclomaltodextrinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.54 Position : 2134800 - 2136539 bp Length : 1740 bp Strand : + Note : PFAM: glycosyl hydrolase, family 13, catalytic domain; glycoside hydrolase, family 13, N-terminal Ig-like domain; KEGG: gct:GC56T3_2858 alpha amylase catalytic region; SMART: glycosyl hydrolase, family 13, subfamily, catalytic domain DNA sequence : ATGAATAAAGAAGCACTATGTCATATCCCGAAAAGTAATTATGCGTATGCTTATAAGTTAGATGAACTGCATATTCGCTT AAGGACCGCCAAAGATGATTTAGAGGAAGTTACTTTGTTTTATGGCAATAAGTTTAATTGGCAAAATAAAAAGAGTGGGC AGATGCAAAAGGTTTATCAAGATAAGTATTATGACTACTACGAGTATAGGCTTCAATTAGAGGATACTAGACTTGGTTAT TACTTTGGATTAAAAAAAGGTGAAGAGTATTTATTTTTAACAGAGGTGGGATTAGAAAAATCATTTAATGATGATATGGC TTATTGCTATTATTTTCAATATCCCTTTATTAATGCAGAAGATGTACATAAGCAGCCTTCTTGGCTTCAACATGCTATTT TTTATGAGATTTTTGTAGAACGTTTTTTTAATGGAGATGTAGCAAATTCTCCAATACCCTTAACGCCCTGGGAAGATAAT CCTACGCCTAAAAGTTTTTTGGGAGGGGATCTAAAGGGTATTATTAAAAAGTTAGATTACTTAGAAAATCTGGGTATTAA TGCTATTTATTTAACTCCTATTTTTGAAGCTCCTTCTAATCATAAATATGATACTGTAGATTACATGCGAATTGATACTT ATTTCGGAGATGAAAAAATTTTTGAGGAACTAGTCTTAAAAGCACATCAAAAAGGGATGAAAATTATTTTAGATGCAGTG TTTAATCATTGTGGTATGGCATTTGCTCCATTTCAAGATGTGGTTCAAAAAGGGCGAGCATCTAAGTATTATGATTGGTT TTTTATTGAAGGGGAGAAAGTGATTCTAGAGCCGCCTAACTATTTAACTTTTTCTCAGGTGCCTTATATGCCAAAACTAA ATACAGCTCATCCAGAAGTAAGAGAGTATCTTTTTTCCGTTGTTCGTTATTGGACCAAAACCTATGGTATTGATGGCTGG CGTTTAGATGTATCAGATGAAATCGAACATGGCTTTTGGAGAGCATTTAGAGAACTAGTAAAAGGCATTAATCAAGAGGT GGTGATTATTGGAGAGAATTGGCACAATGCTTATCCGTGGCTCATGGGTGATCAATTTGATAGTGTCATGAATTATCCAC TTACTAAATTAATGGGAGATTATTTTGCTAGAAAGGCTATAGATGCTAAGGCTTTTAAAGAACAACTGACGAGTTTATAT ATGCGTTATCCTAAGCAAGTTAATGAAGGGATGCTTAATCTTTTAGATAGTCATGATACAGAAAGGTTTTTAACTTTATG TCAGGAAGATAAGGCTTCACTTAAAAATGCAGTAGCTTTTTTATTCGGCTATATAGGGATTCCGTGTACTTATTATGGTA CAGAAATTGGGATGATAGGTGAATATGATCCAGGATGCAGAAAAGGATTTGATTGGTGTGAAGCACATTGGGATCAAGAT GTATATCATTATTATAAGCGATTAATAGCGATTAGAAAGCAAGAAAAAGTACTTCAAACAGGAGAAATGAGCTTGTTTTA CCAAGGGAAGCTTTTTGTTATGAGACGATATGATCAGGAAGCAATGATAGATATAGTGATCAATCAAACACAGGGGCCCC TCACTTATGAAATAGCATACAGAGGAAAGAAGGAAGGAGGTAGATGTGAAGAGGTATTATATAATACCCCTATCAATCAA AAAGACAGCTTGGTTATTCCTGCAGGACACACTTATTATATCAAAATAATAAATAGCTAA Protein sequence : MNKEALCHIPKSNYAYAYKLDELHIRLRTAKDDLEEVTLFYGNKFNWQNKKSGQMQKVYQDKYYDYYEYRLQLEDTRLGY YFGLKKGEEYLFLTEVGLEKSFNDDMAYCYYFQYPFINAEDVHKQPSWLQHAIFYEIFVERFFNGDVANSPIPLTPWEDN PTPKSFLGGDLKGIIKKLDYLENLGINAIYLTPIFEAPSNHKYDTVDYMRIDTYFGDEKIFEELVLKAHQKGMKIILDAV FNHCGMAFAPFQDVVQKGRASKYYDWFFIEGEKVILEPPNYLTFSQVPYMPKLNTAHPEVREYLFSVVRYWTKTYGIDGW RLDVSDEIEHGFWRAFRELVKGINQEVVIIGENWHNAYPWLMGDQFDSVMNYPLTKLMGDYFARKAIDAKAFKEQLTSLY MRYPKQVNEGMLNLLDSHDTERFLTLCQEDKASLKNAVAFLFGYIGIPCTYYGTEIGMIGEYDPGCRKGFDWCEAHWDQD VYHYYKRLIAIRKQEKVLQTGEMSLFYQGKLFVMRRYDQEAMIDIVINQTQGPLTYEIAYRGKKEGGRCEEVLYNTPINQ KDSLVIPAGHTYYIKIINS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09660 | YP_002510949.1 | alpha-amylase | Not tested | PPI-1 | Protein | 8e-96 | 44 |
