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Name : Clole_1716 (Clole_1716) Accession : YP_004308638.1 Strain : Clostridium lentocellum DSM 5427 Genome accession: NC_015275 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1937375 - 1939057 bp Length : 1683 bp Strand : + Note : KEGG: tpd:Teth39_1067 type II secretion system protein E; PFAM: type II secretion system protein E; general secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core DNA sequence : ATGAAGAAGATGCAAAGAAAAAGATTGGGAGATTTGCTCTTTGAGACAGGTATGATTACCGGGGAACAGTTAGAGTGGGG AATTAAAGAGCAAAAACGTACAGGGAAACGTATTGGAGAGATTTTTGTAGAAAAAGGTATTGTCACCGAAGAAAATATCT TGGGAGCTCTAGAATTCCAATTGGGTATCCCGCATATGAATCTTGAGCAATATACTATTGATTACAATATTGCGTCTAGA GTCCCAGAAAGTATTGCAAGGCGTTATACAGTGATTGCAGTAGGCATAGATGATAACAAGTTAAAGGTGGCCATGAAAGA TCCACTAAACATGTTTGCACTGGATGATTTAAAGTTAAGTACTAAAATGGAGATTATCCCTATTTTAGCATCTGAAAAAG GAATCATTAATGTTATCAATCAGACTTATACTTCTGCACAGACAAAGAGTATTGTATCCCAAGTGGAAAAGAAGCTACAA GAGGAATCTCAAAAACAAATAACTTTAGAAGTACCAGATGAAGATGAAAGTGCACCTATGGTTCAGCTTGTTAATAATAT TCTAGAACGTTGTATTTTAAAGGGAGCTTCAGATATACATATTGAGCCATTTGAGTATTATGTACGTATTCGCTATCGTG TAGACGGTAGATTACATGAATTAGCGCAAACTAAAAAAGAAACTTTAAATGCTATTACAACGCGTATTAAGATTTTATCT GGGTTAGACATTGCAGAGAGACGTTTACCACAAGATGGGCGTATGTCTAAGTCTGTAAATGGTCAGCAGGTAGACCTTCG TGTGAGCATTTTACCAACCATTTATGGTGAAAAAACAGTTATACGTTTTATTTACCGTACAGGAAATAATTTAACTTTGA AGGATATAGGCTTTCATCCAGACGATTATAAGAGAGTAGAAGATTTGTTGAAAAATCCCCATGGTATTATTCTTTTGACA GGGCCTACCGGTAGTGGTAAGTCTACTACTTTGGCAGCAGCGTTAAAAGTACTTAATCAAGATTTTGTTAATATTATTAC AGTTGAAGACCCAGTTGAAAATATGATAGAGGGTATAAATCAAGTAGCAGTTAATACAAAAGTTGGATTAACCTTTGCAA GTGCCTTGCGTTCTATCTTACGTCAAGACCCGGATATCATCATGATTGGTGAAATGCGCGATAGTGAAACAAGTTCTATT GCTGTACGAGCAGCTATTACAGGTCACTTAGTATTAAGTACACTTCATACTAATGATGCAGCTAGTTCTATTCCTCGTTT AGTGGATATGGGGACAGAAGCTTACATGGTTGGAGCAGCCATAAAAGGTGTTATTTCACAGCGTTTAGTACGTAGGTTAT GTCCTAGTTGCAGGAGTAAACATCAAGTAACAGCTACTGAATCAAGAATATATAATGTTCCAGAGGGAACGGAAGTTTAT CAGGCTAGAGGATGTAGCTTGTGTAATCAAACAGGATATAAAGGAAGATTAGCTGTACACGAAGTATTGGTTGTTGACTC ACATTTAGAAGATATGATTTCTTCAGGCAAAACGAGTACAGAAGATATTAAAAACGAAGCTATTAAGAGAGGAATGAGAA CATTATGGGACAATGCTTTTCATAATGTTCTTCAAGGAAAAACAACACTTGAAGAAATGCTAAGAATTGCATATGAGCAG TGA Protein sequence : MKKMQRKRLGDLLFETGMITGEQLEWGIKEQKRTGKRIGEIFVEKGIVTEENILGALEFQLGIPHMNLEQYTIDYNIASR VPESIARRYTVIAVGIDDNKLKVAMKDPLNMFALDDLKLSTKMEIIPILASEKGIINVINQTYTSAQTKSIVSQVEKKLQ EESQKQITLEVPDEDESAPMVQLVNNILERCILKGASDIHIEPFEYYVRIRYRVDGRLHELAQTKKETLNAITTRIKILS GLDIAERRLPQDGRMSKSVNGQQVDLRVSILPTIYGEKTVIRFIYRTGNNLTLKDIGFHPDDYKRVEDLLKNPHGIILLT GPTGSGKSTTLAAALKVLNQDFVNIITVEDPVENMIEGINQVAVNTKVGLTFASALRSILRQDPDIIMIGEMRDSETSSI AVRAAITGHLVLSTLHTNDAASSIPRLVDMGTEAYMVGAAIKGVISQRLVRRLCPSCRSKHQVTATESRIYNVPEGTEVY QARGCSLCNQTGYKGRLAVHEVLVVDSHLEDMISSGKTSTEDIKNEAIKRGMRTLWDNAFHNVLQGKTTLEEMLRIAYEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-88 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-88 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Clole_1716 | YP_004308638.1 | type II secretion system protein E | VFG0182 | Protein | 8e-86 | 46 |
| Clole_1716 | YP_004308638.1 | type II secretion system protein E | VFG2048 | Protein | 3e-89 | 42 |
