Gene Information

Name : Clole_1616 (Clole_1616)
Accession : YP_004308539.1
Strain : Clostridium lentocellum DSM 5427
Genome accession: NC_015275
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1809551 - 1811686 bp
Length : 2136 bp
Strand : +
Note : KEGG: ere:EUBREC_0832 transcription accessory protein; PFAM: Tex-like protein, N-terminal; ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1

DNA sequence :
ATGAACATTGTACAGATTTTGCAAGATGAATTGCAAATTAAGAGAACACAAGTAGAAAATACGATTAAGCTCATTGATGA
AGGAAACACAATTCCTTTTATAGCACGATATAGAAAGGAGTTAACAGGGGGACTTAATGATGAGATACTTCGTCAATTTG
GAGAACGCTATACCTACTTGCAAAACCTGTTAGCACGTAAAGAGCAAGTACTTAAAAGTATAGAGGAGCAAGGAAAGCTG
ACAGTAGAATTAAAACAAGCTATCGAAATGGCTACTACAGCTACAGAGGTAGAAGATTTATATTTACCTTATCGTCCGAA
GAAACGTACAAGAGCAACAATTGCTAAAGAAAGAGGATTAGAACCTTTAGCAGAATTGATAAAAATGCAACAAGTATCAG
ATATTGAGACTATAGCAAAAGATTATATAGATGAAGAAAAAGGCGTAGGTGATGTGAAGGCGGCCTTAGAAGGTGCAAAA
GACATCTTAGCTGAAGAAATATCTGATCGTGCAGACTTAAGAGGATATATTAGAAAAGCAACTTTTAGCAAAGGTCTTAT
AGTGACTAAAGCTAAAGATGAAAAAGAACAAACTGTTTATGATATGTACTATGACTATAATGAAAAGTTAAGTAATATGC
CAGGACATCGTATCTTAGCTATTAATCGAGGAGAAAAAGAAAAGGTACTGACCGTTAAAATAGAAGCACCAGTAGAAGAA
ATCATGACTTATTTAGAACGTCAAGTCATTATAAAGGAAAGTACAACGCATCTATTATTAGAAGAAATGCTTCAAGATAG
TTATAAGAGACTCATTGCACCAGCAATTGAACGTGATATTAGAAATGAGCTAACAGCAAAAGCAGAAGATGGTGCATTAG
AGGTATTTAAGAAAAATCTTTATCAACTTTTAATGCAAGCCCCTATTAAGGGACATCAAGTAATGGGGATAGACCCAGCT
TTTAGAACAGGATGTAAAATAGCTGTTGTAGATGAGACGGGAAAGAAACTAGATAAGACAGTTGTATTTCCTACAGCACC
TCAAAATAAAACAGAAGAAGCTAAGGTGGTATTAAAGGATTTAATTAAAAAATATAAGGTTGATCTTTTATCTATTGGTA
ATGGTACTGCTTCTAGAGAAACAGAAAAGTTCGTAGCTGATATGTTACAAGAAATAAATGAAACGATTCATTATGTTATT
GTTAATGAAGCAGGCGCATCTGTTTATTCTGCATCAGTTTTAGCAACTGAGGAGTTTCCTAATGATGATGTAGGCGTAAG
AAGTGCAGTATCTATTGCTAGAAGACTTCAAGACCCATTAGCTGAACTCGTTAAGATTGATCCTAAAGCAATAGGTGTGG
GTCAATACCAACATGATATGAATCAAAAACGTCTAGAGGAGTCCTTAGGTGGCGTAGTAGAAAGTGCAGTAAATGAAGTA
GGTGTGGATATTAATACAGCTTCAGCTTCCTTATTGCAATATGTAGCAGGCATTAAGAAAACTGTTTCACAGAATATTAT
TGCTTATAGAGAAGAAGTAGGAGCTTTTAAAAGCCGTAGTGAGATTAAGAAAGTAAAAGGGCTAGGTCCTAAAGTGTTTG
AACAATGTGCAGGTTTCCTTCGTATTACTAATGGAAAAAACTTTTTAGATGCTACAGGAGTTCATCCAGAATCTTATGCA
GTGGCAGAGGAATTACTTAAAGTAGTTGGATATGGAAAAGATGAATTAAAAGCCAGAAATTTTAAAAATCTACATGAGAA
AGTTGGTAATATTGAAATTTTAGCAGAGCAATTAGGTACAGGTGTACCTACGCTACAAGATATTATTAAAGAATTAGAAA
AGCCTGGACGTGATCCTCGCGAAGATATGCCAAAACCTATTCTTCATAGTGAAATCTTAGAAATCAAGGATTTAAAGGAA
GGTATGAAGTTAAAAGGAACAGTACGTAATATTGTAGATTTTGGTGCATTTATTGATATTGGTGTGCATCAAGATGGTTT
AGTGCATATTTCTCAAATGAGTAATAAATTTATCAAACATCCTTTAGAAGTGGTTAAAGTAGGAGATATTGTCGAGGTAT
CTATTTTATCTGTAGACACTATTAAAAATAAAATTGCATTAAGCATGAAATCCTAA

Protein sequence :
MNIVQILQDELQIKRTQVENTIKLIDEGNTIPFIARYRKELTGGLNDEILRQFGERYTYLQNLLARKEQVLKSIEEQGKL
TVELKQAIEMATTATEVEDLYLPYRPKKRTRATIAKERGLEPLAELIKMQQVSDIETIAKDYIDEEKGVGDVKAALEGAK
DILAEEISDRADLRGYIRKATFSKGLIVTKAKDEKEQTVYDMYYDYNEKLSNMPGHRILAINRGEKEKVLTVKIEAPVEE
IMTYLERQVIIKESTTHLLLEEMLQDSYKRLIAPAIERDIRNELTAKAEDGALEVFKKNLYQLLMQAPIKGHQVMGIDPA
FRTGCKIAVVDETGKKLDKTVVFPTAPQNKTEEAKVVLKDLIKKYKVDLLSIGNGTASRETEKFVADMLQEINETIHYVI
VNEAGASVYSASVLATEEFPNDDVGVRSAVSIARRLQDPLAELVKIDPKAIGVGQYQHDMNQKRLEESLGGVVESAVNEV
GVDINTASASLLQYVAGIKKTVSQNIIAYREEVGAFKSRSEIKKVKGLGPKVFEQCAGFLRITNGKNFLDATGVHPESYA
VAEELLKVVGYGKDELKARNFKNLHEKVGNIEILAEQLGTGVPTLQDIIKELEKPGRDPREDMPKPILHSEILEIKDLKE
GMKLKGTVRNIVDFGAFIDIGVHQDGLVHISQMSNKFIKHPLEVVKVGDIVEVSILSVDTIKNKIALSMKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 1e-154 48