Gene Information

Name : SL003B_0968 (SL003B_0968)
Accession : YP_004302697.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Virulence
Product : transcriptional regulator protein-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1038209 - 1038376 bp
Length : 168 bp
Strand : -
Note : -

DNA sequence :
TTGAGACAGGAGAACGGCTGGTCTCAGGCAGATCTGGCGGCGCGGCTCGACGTTTCCCGTCAAACGGTCATTTCCATCGA
AACCGGGAAATACGACCCAAGCCTGCCGCTCGCCTTTGCGATCGCCCGCCTGTTCGGGAAGAAGGTCGAGGATGTCTTCG
AGGCGTGA

Protein sequence :
MRQENGWSQADLAARLDVSRQTVISIETGKYDPSLPLAFAIARLFGKKVEDVFEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-08 49
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-06 49
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-06 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SL003B_0968 YP_004302697.1 transcriptional regulator protein-like protein VFG2168 Protein 1e-06 49
SL003B_0968 YP_004302697.1 transcriptional regulator protein-like protein VFG2175 Protein 1e-06 49