|
Name : SL003B_0752 (SL003B_0752) Accession : YP_004302481.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Unknown Product : Xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 796074 - 797390 bp Length : 1317 bp Strand : + Note : - DNA sequence : GTGGCCACTGGATTTTTCGACGGACTGGAGCCGGTCCGCTTCGTCGGCGCCGATGCCCGCGAGCCCTACGGCTATCGCTT CTACGACAAGGACAGGGTGGTGCTCGGCAAGCGCTTGGAGGACCATCTGCGGCTGGCCGTGTGCTATTGGCATTCGTTCT GCTGGCCGGGCACCGACCCGTTCGGCGGCGAGACGTTCCAGCGCGCCTGGATGGCGGCGGGCGACCCGATGGCGCAGGCG CGGCTGAAGGCGGACGTCGCCTTCGAGATGTTCGACCTGCTCGGCCTGCCGTTCTTCACCTTCCACGACCGCGACATCGC GCCGGAGGGCGCGACGCTGGCGGAGAGCAACGCCAACGTCAACGCCATCGCCGATGTGTTCGAGGGCAAGATGGCCGACA GCGGGACGAGGCTGCTGTGGGGCACGGCGAACCTGTTCTCCAACCGCCGCTACATGGCCGGGGCGGCGACCAACCCGGAC CCGGAGGTGTTCGCCTACGCGGCCGCACAGGTGAAGACCGCGCTCGACGTCACCCATCGCCTCGGCGGCGCCAACTACGT GCTGTGGGGCGGGCGCGAGGGCTACGAGACGCTGCTCAACACGGACCTGAAGCGCGAGCTGGACCAGCTCGGACGGTTCC TCGCCCTGGTGGTCGAGTACAAGCACCGGATCGGTTTTACGGGAACGATCCTGATCGAGCCGAAGCCGCAGGAGCCGACC AAGCACCAGTACGACTTCGACGTCGCCACGGTCTACGGCTTCCTGAAGGCCTACGGGCTGGAGGCCGAGGTCAAGGTCAA CATCGAGCAGGGCCATGCGATCCTGGCCGGCCATTCGTTCGAGCACGAGCTGGCGCTCGCCCATGCGCTCGGCATCTTCG GTTCGGTCGACATGAACCGCAACGACTATCAGTCGGGCTGGGACACCGACCAGTTCGCCATGAACGTGCCGGAACTGGCG CTGGCCTATCGCGAGATCCTCAAGGGCGGCGGCTTCACGACCGGCGGCACCAACTTCGACGCCAAGCTGAGGCGCCAGTC GCTCGATGCGGTCGATCTGATCCAGGCCCATGTCGGTTCGGCCGACGCGATCGCGCGCGGGCTGTTGGCGGCGGCGGCGA TGATCGAGGACGGGCGGCTGCAGGCGACCGCCGACGCCCGCTATGCCGGCTGGGACAGGCCGGAGAACGCGGCGATCCTT TCGGGCGAGCGGTCGCTGGAGGATCTGGCGGAGCGGGTCAGCCGCGACCGCCTGGAGCCGCAGCCGGTGTCGGGACGGCA GGAGTACCTGGAAAGTCTGGTCAACCTGTTCGTGTGA Protein sequence : MATGFFDGLEPVRFVGADAREPYGYRFYDKDRVVLGKRLEDHLRLAVCYWHSFCWPGTDPFGGETFQRAWMAAGDPMAQA RLKADVAFEMFDLLGLPFFTFHDRDIAPEGATLAESNANVNAIADVFEGKMADSGTRLLWGTANLFSNRRYMAGAATNPD PEVFAYAAAQVKTALDVTHRLGGANYVLWGGREGYETLLNTDLKRELDQLGRFLALVVEYKHRIGFTGTILIEPKPQEPT KHQYDFDVATVYGFLKAYGLEAEVKVNIEQGHAILAGHSFEHELALAHALGIFGSVDMNRNDYQSGWDTDQFAMNVPELA LAYREILKGGGFTTGGTNFDAKLRRQSLDAVDLIQAHVGSADAIARGLLAAAAMIEDGRLQATADARYAGWDRPENAAIL SGERSLEDLAERVSRDRLEPQPVSGRQEYLESLVNLFV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 9e-88 | 45 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 7e-88 | 45 |
