|
Name : SL003B_0745 (SL003B_0745) Accession : YP_004302474.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 786920 - 787930 bp Length : 1011 bp Strand : + Note : - DNA sequence : GTGCGGACAGTTCTGGTTACCGGGTCGGCCGGGTTCATCGGGTCGCATGTGGCGCAGCGGCTGCTCGACGACGGCTGGCG GGTCGTCGGGATCGACAACGTCAATGCCTATTACGATCCGGCGCTGAAGGAGGCGCGGCTCGCCCGGCTGAGGGCATCGA ACCATTTCCACGAGGAGCAGGTGTCGGTCGAGGACCGCGAGGCGGTGACGGCGGTGTTCCGGCGCCACGCGCCCGAGCGC ATCATCCACCTGGCCGCCCAGGCGGGCGTGCGCCACAGCCTCGACGCGCCGCAGGACTATGTCGACGCCAACATCACCGG CTTCCTGAACATCCTGGAAGCGGCGCGCGCGCATCCTGTCGACCACCTGGTGTTCGCCTCGACCTCGTCGGTGTTCGGCC TCGACAAGGCGATGCCGCTGTCGCCGCACCGCGGCGGCAACCATCCGGTGTCCTTCTATGCGGCGACCAAGAAGGCCAAC GAGATGATGGCGCATGCCTACGCCCATCTGTTCGCCATCCCCTGCACGGGGCTGCGCTTCTTCACCGTCTACGGCCCGTG GGGTCGGCCGGACATGGCGCTGTTCAAGTTCACCAAGGCGATCCTCGCGGGCGAGCCGGTGCCGCTCTACAACGAGGGGC GCATGGTGCGTGACTTCACCTATATCGACGACATCGTGGAAGGGGTGGTGCGGATCGCCGACAGGCCGGCCGCGCCTGAT CCGGCCTGGGAAGCGGAACGGCCCGATCCGGCGTCGAGCGCCGCCCCTTACCGGATCTACAACATCGGCAACAGCCAGCC GGTCGAACTGCTGACCTACCTGGAGGCGATCGAGGCGGCGACCGGCCGGACCGCCCGACGCGAGCTGCTGCCGATGCAGC CGGGCGACGTCTCCGCCACCTGGGCCGACGTCGAGGACCTCGTCGCGGCGACCGGTTTCCGGCCGAGCACGCCGGTCGCC GACGGGGTGAGGGCCTTCGTCGACTGGTATCGGGACTATTACGGCGTGTGA Protein sequence : MRTVLVTGSAGFIGSHVAQRLLDDGWRVVGIDNVNAYYDPALKEARLARLRASNHFHEEQVSVEDREAVTAVFRRHAPER IIHLAAQAGVRHSLDAPQDYVDANITGFLNILEAARAHPVDHLVFASTSSVFGLDKAMPLSPHRGGNHPVSFYAATKKAN EMMAHAYAHLFAIPCTGLRFFTVYGPWGRPDMALFKFTKAILAGEPVPLYNEGRMVRDFTYIDDIVEGVVRIADRPAAPD PAWEAERPDPASSAAPYRIYNIGNSQPVELLTYLEAIEAATGRTARRELLPMQPGDVSATWADVEDLVAATGFRPSTPVA DGVRAFVDWYRDYYGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-81 | 50 |
