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Name : gabD1 (SL003B_0719) Accession : YP_004302448.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Unknown Product : Succinate-semialdehyde dehydrogenase [NADP+] (SSDH) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 758530 - 759981 bp Length : 1452 bp Strand : + Note : - DNA sequence : ATGCGGTCGCTTACCGATCCGACGCTGCTGAAATCCCAGTGCTATATCGACGGTTGCTTCGTGGGCGAGGGACGCGTCGA CGTCACCGACCCGGCCACCGGTCGGGTCCTCGCCAAGGTGCCCGACATGGGCGCCGACCAGGCTGTGCAGGCCGTCGAGG TTGCTGCGGCGGCGTTCAAGTCCTGGGCCGCCCTGACGGCCCGGGAGCGCAGCACGGTGCTGCGCGCCTGGTTCGACCTG ATCATGGCCAACCGGGCGGACCTCGCCGCGATCCTCACCAGCGAGCAGGGTAAGCCCTATCCTGAAGCATTGGGCGAGAT CGACTATGCGGCGTCGTTCGTCGAGTTCTACGCCGAGGAGGCCAAGCGAGTGCTGGGCGAGATCCTGCCCTCGCACACCA CTGATGCCCGCCTGCTGGTGCTGCGCCAGCCGATCGGCGTCGTCGCTGCGATCACGCCGTGGAACTTTCCGGCGGCCATG ATCACCCGCAAGATCGCGCCGGCACTCGCCGCCGGATGCACGGTGGTTGTCAAGCCGGCGCCAGAAACGCCACTGACGGC CCTGGCGTTGGCCGAACTGGCCCATCGCGCCGGCTTCCCCAAAGGCACAGTGAACGTGCTGACCGGCGATGCCGTGGCCA TCGGCGGCGTGCTTACCAGCCACCCCAAGGTCCGTTTCGTCGGCTTCACCGGTTCGACCGCTGTCGGCAAGCTGCTGATG GCTCAGGCGGCAACGACGGTCAAGAAGGTGGCGCTCGAACTCGGCGGCAATGCGCCGTTCATCGTCTTCGACGATGCCGA TCTCGATGCGGCCGTCGAGGGAGCGATTGCGTCGAAATACCGCAACATGGGTCAGACCTGCGTCTGTTCGAACCGCTTCT ACGTCCATGATGCGGTGTACGACGCCTTTGTCGACAAGCTGGCGGCGCGCGTGGCCACGCTCAAGGTCGGCAACGGCTTT GAAGAGGGTGTCGTCCAGGGACCGTTGATCAACGAGCGGGCGGTTTCCAAGGTCGAGCGGCACATTTCCGATGCGCTCGG CAAGGGAGCGCGGGTGGTGGCGGGCGGCAAACGGCACACACTCGGCCACACCTTCTTCGAGCCTACGGTGATTGCGGATG CGGCAGAAGGCATGCAGATCGCGGCCGAGGAGACCTTCGGGCCCGTCGCGCCGGTCTTCCGCTTCCATGCCGAAGCCGAG GCGATCGCGGCTGCCAACAACACGGAGTCGGGGCTCGCCGCCTATTTCTACGCGCGGGACGTGGGGCGTATCTTCCGGGT CCTGGAAGCGCTCGAGTACGGCATGGTCGGGGTCAATTCGGGTCGTATCTCGACCGAACTGGCGCCGTTTGGCGGCATCA AGGAAAGCGGCAACTCTCGCGAAGGATCGCACCACGGCATCGCCGAGTTCACAGAGCTGAAATACGCTTGCATCGGCGGT CTGACAGCCTGA Protein sequence : MRSLTDPTLLKSQCYIDGCFVGEGRVDVTDPATGRVLAKVPDMGADQAVQAVEVAAAAFKSWAALTARERSTVLRAWFDL IMANRADLAAILTSEQGKPYPEALGEIDYAASFVEFYAEEAKRVLGEILPSHTTDARLLVLRQPIGVVAAITPWNFPAAM ITRKIAPALAAGCTVVVKPAPETPLTALALAELAHRAGFPKGTVNVLTGDAVAIGGVLTSHPKVRFVGFTGSTAVGKLLM AQAATTVKKVALELGGNAPFIVFDDADLDAAVEGAIASKYRNMGQTCVCSNRFYVHDAVYDAFVDKLAARVATLKVGNGF EEGVVQGPLINERAVSKVERHISDALGKGARVVAGGKRHTLGHTFFEPTVIADAAEGMQIAAEETFGPVAPVFRFHAEAE AIAAANNTESGLAAYFYARDVGRIFRVLEALEYGMVGVNSGRISTELAPFGGIKESGNSREGSHHGIAEFTELKYACIGG LTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-126 | 60 |
