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Name : clpB (SL003B_0654) Accession : YP_004302383.1 Strain : Polymorphum gilvum SL003B-26A1 Genome accession: NC_015259 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 692603 - 695509 bp Length : 2907 bp Strand : + Note : - DNA sequence : ATGGCAAACGGAGCTTGCGATATTTGCGGTCGCCCGGCGACGGCGCGCGTGCGCGCCTCGGTGAACGGCAGAATTCAGAA CATGGAGCTTTGCGACCAGCATTACCGCGAGATGGTGCGCCGGTCGGGCCGCAGCGCCTCGCCGCTGGAGTCCCTGTTCG GGCGGCATTCCCTTTTTGACGAGTTCTTCGGCGACAGCGGATTCGGCAGCCTCTTTGGTGACAGCCCGCTGCGGGGCGGC ACGCTCGGCTCCATGGGTGACGGCGATGACGATGTCGTCGAGGCCACTTTCGGTGAGGGTGCGCCGCGGCGTGGATCGCG GCGCGGCGGCGGACGCACCATCGCTGACCGGCTGAGCGAACAGGGCAACAAGCTGTTGCAGGATGCCGCACAGAAGGCCG GAGAGTTCGGGCGCAGCGAGGTCGATACCGAACATTTGCTTTTGGCATTGACCTCGTCCGACGTCGTCAAGACGATCCTG GAACAGTTCAAGGTCGATGTGGACGATCTGCGGCGCCAGATCGAGAAGGAAGCGAAGCGTGGAGAGGCCAAGACGCAGGG CGAAATCGGCGTCAGTCCTCGCCTGAAGGACGCGCTGAACCGGGCCTTCATCGCCTCGAACGAACTCGGCCATTCCTATG TCGGCCCCGAGCATCTGCTGATCGGCCTCGCCGAGGAGGGCGAGGGCCTGGCCGCGTCTATCCTGCGCAAGTACGGCCTC ACGCCGCAGGCGCTTCGCCAGCAGGTGACCAAGGTCGTGGGCAAGGGAGCCGAGGAAGGCCGCGTGGAGGCGCCTTCCAG CACGCCCGATCTGGACCAGTTCAGCCGTGACCTGACGAAGCTCGCCCGCGAGGGCAAGCTCGACCCCGTCATCGGCCGTG CCCGCGAGATCGAGACGACGATCGAAGTGCTGGCCCGCCGGAAAAAGAACAACCCGGTGCTGATCGGCGAGCCCGGCGTG GGCAAGACCGCCATCGTCGAGGGACTTGCACAACGGATCGTCGCGGGGGAAGTGCCAGAGGCGCTGCGCGACAAGCGGCT CGTGGAGCTCAACATCAACTCGATGGTGGCCGGGTCGAAGTATCGCGGCGAGTTCGAGGAGCGAGTCCAGAAGATCCTCA AGGAGATCACCGAGGAGAAGGACAGTCTGATCCTGTTCATCGACGAGATCCATACCATCGTCGGCGCCGGTCAGGGCGGC GGCGAAGGCGGTCTAGACATCGCCAACACCTTCAAGCCGGCGTTGGCGCGGGGCGAGCTGAACCTGATCGGTGCGACGAC GCTCAACGAGTACCAGAAATACATCGAGAAGGACGCAGCACTCGAACGCCGCTTCCAGCCGGTTTATGTCGAGGAACCCA CGGTCGCTCAGGTCATCATGATCCTGCGGGGTCTGCGCGACACGCTGGAGGCGCACCACAAGGTGACGATCACCGACGAG GCCATCGTCGCGGCGGCCGAGCTTTCGGACCGCTACATCACTGGCCGTTTCATGCCTGACAAAGCGATCGACCTGATCGA TCAGGCCGCCGCACGTGTGAAGATCAGCGCCACAGCGCGCCCCGTGGACGTCCAGGAGCTGGAGGCCGAGGTCGCGCAGA TCAAGCGCGAGCAGGACTATGCCGCAGCCCGCAAGCAATTCGACCGGGCAGCGGAATTGAAGAGGGAACTCGAACAGAAG CAGAAGGAGCTGGACGAGCTTCTGGAGATTTGGAAGCGCGACCAGGCTTCGGCGACCGCCGAGGTGCGCGCCGATCATGT TGCGCAGATCGTCTCGAAGATCACCGGCGTTCCGGTCACTGATCTGACCACCGAGGAGAAGGACAAGCTCCTCAAGCTTG AGGAGAAGCTGCACGAGCGCGTCATCGGCCAGGAAGAGGCCATCCGCGCCGTGGCCGATGCGGTGCGCCTCGCGCGCGCA GGACTGCGCGAGGGACGTGGCCCGACCGCGACCTTCCTGTTCCTCGGGCCGACCGGGGTTGGCAAGACGGAACTGGCCAA GACGCTCGCCGAAGTAATCTTTGGCGATCAGGACGCAATCATCCGCATCGACATGTCCGAGTATGGCGAGCGCCATTCGG TCGCCCGGCTGGTGGGCGCGCCTCCCGGCTACGTCGGATACGACGAAGGCGGGCAACTGACCGAGAAGGTGCGCCGTCGG CCCTATTCGGTCGTGCTGCTCGACGAGATCGAGAAGGCGCACCCGGATGTCTACAACATTCTGTTGCAGGTGTTCGACGA CGGCCGGCTGACCGACGGCAAGGGGCGCGTGGTGGACTTCACCAACACCATCATCATCGCCACCTCGAACCTCGGTTCGG ACATCATCCAGCGTAACCTTAAGAAACGCGGCACCAAGGAGTTCGACGAGGCAAAGCAGAAGTCCGAACTGATGGAAGTG TTGCGCGGCCATTTCCGGCCCGAGTTCATCAACCGGATCGACGAGATCATCGTCTTCCACTCACTGAATCAGTCGGAGAT CCGCCAGATCGTCGAGTTGCAGCTGAACCGGGTGAAGAGGACCGCCCTCGGCCAGGGCGTCGAACTCGAGTTCGACGTGG GCGTGGTGGACCACTTCGGCGCAGTGGGCTTCCGCCCTGAATTCGGCGCCCGCGAGCTGCGCCGGCTGATCCGGTCGGAG CTGGAGACCGAGCTAGCCCGTGAGATGCTCTCCGGGCGGATCGAGGATGGTGACAAGGTCCGCGTCGCTTGGTCGCCGGG CGAACAGAAGGTGGTGTTCGAAAAGATCGCAAAGGACAGCGGTGAGGACAGCCCCGACGATCAGGCCGAGGCCGGGATCG ACGAGTCCAGCGAAGTTGCCGAAAACAAGGCGGACGCTCCGACGCCCGATGTCCCGGTCGACACCAAGGATAAGGGGCAG TCCAAGGACGGTAAGTCTACCGGGTGA Protein sequence : MANGACDICGRPATARVRASVNGRIQNMELCDQHYREMVRRSGRSASPLESLFGRHSLFDEFFGDSGFGSLFGDSPLRGG TLGSMGDGDDDVVEATFGEGAPRRGSRRGGGRTIADRLSEQGNKLLQDAAQKAGEFGRSEVDTEHLLLALTSSDVVKTIL EQFKVDVDDLRRQIEKEAKRGEAKTQGEIGVSPRLKDALNRAFIASNELGHSYVGPEHLLIGLAEEGEGLAASILRKYGL TPQALRQQVTKVVGKGAEEGRVEAPSSTPDLDQFSRDLTKLAREGKLDPVIGRAREIETTIEVLARRKKNNPVLIGEPGV GKTAIVEGLAQRIVAGEVPEALRDKRLVELNINSMVAGSKYRGEFEERVQKILKEITEEKDSLILFIDEIHTIVGAGQGG GEGGLDIANTFKPALARGELNLIGATTLNEYQKYIEKDAALERRFQPVYVEEPTVAQVIMILRGLRDTLEAHHKVTITDE AIVAAAELSDRYITGRFMPDKAIDLIDQAAARVKISATARPVDVQELEAEVAQIKREQDYAAARKQFDRAAELKRELEQK QKELDELLEIWKRDQASATAEVRADHVAQIVSKITGVPVTDLTTEEKDKLLKLEEKLHERVIGQEEAIRAVADAVRLARA GLREGRGPTATFLFLGPTGVGKTELAKTLAEVIFGDQDAIIRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRR PYSVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRNLKKRGTKEFDEAKQKSELMEV LRGHFRPEFINRIDEIIVFHSLNQSEIRQIVELQLNRVKRTALGQGVELEFDVGVVDHFGAVGFRPEFGARELRRLIRSE LETELAREMLSGRIEDGDKVRVAWSPGEQKVVFEKIAKDSGEDSPDDQAEAGIDESSEVAENKADAPTPDVPVDTKDKGQ SKDGKSTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-150 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004302383.1 | ATPase AAA | VFG0079 | Protein | 3e-161 | 52 |
