Gene Information

Name : SL003B_0630 (SL003B_0630)
Accession : YP_004302359.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Unknown
Product : insertion sequence transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 670085 - 670366 bp
Length : 282 bp
Strand : +
Note : -

DNA sequence :
TTGAAGGACGGACAGATGAAGCGGAAGCGGTTTACGGAAGAGCAGATCATCACGGTGCTCCGGGAGCACGAGGCCGGAGC
GAAGGCGAGCGATCTGGCTCGCAAGCACGGTGTCAGCGAGGCAACGCTGTATAACTGGAAGGCGAAGTATGGCGGGATGG
ACGTGTCCGACGCCAAACGTCTGAAGGCTCTGGAAGACGAGAACGCGAAGCTGAAGAAGCTGCTCGCCGACCAGATGCTG
GAAGCCTCGGCACTTCGCGAGCTTCTGGCAAAAAAATGGTAG

Protein sequence :
MKDGQMKRKRFTEEQIITVLREHEAGAKASDLARKHGVSEATLYNWKAKYGGMDVSDAKRLKALEDENAKLKKLLADQML
EASALRELLAKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-19 56
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 2e-19 56
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 2e-19 56
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-19 55
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 3e-19 53
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-16 49
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 9e-17 49