Gene Information

Name : SL003B_0442 (SL003B_0442)
Accession : YP_004302173.1
Strain : Polymorphum gilvum SL003B-26A1
Genome accession: NC_015259
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 447745 - 448452 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
ATGACGAATGGACCAGCCATTGCGCTCAAGGGCGTGCATCTCAGCCTCGGCGAGGGCGCCGGACGCGTGCATATCCTGAA
GGGGATCGATCTGGAGATCGACGCCGGCACCTCGGTCGGCCTGGTCGGTCCGTCGGGGTCGGGCAAGTCGACCCTGCTGA
TGGTCATGGCCGGCCTGGAACGGGCCGATGCTGGGACCGTGCGGGTGGCCGGCACCGAACTCGGCCCCTTGTCCGAAGAC
GACCTCGCCCGCTTCCGCGGCCGCAACGTCGGCATCGTGTTCCAGTCCTTCCACCTCGTCCCCAACATGACCGCGCTGGA
AAACGTCGCCGTGCCGCTCGAACTGGCCGGCGACCGCGCGGCGTTCGACAAGGCCCGCGCGGAACTGGACGCCGTCGGCC
TCGGTCACCGGATGCACCATTATCCGGCCCAGATGTCCGGCGGCGAGCAGCAGCGCGTCGCGGTCGCCCGCGCCCTGGTC
GTCGAACCGGCGATCCTGATCGCCGACGAACCGACCGGCAACCTCGATGACGCTACCGGCGACCAGATCGTCGAGCTGAT
GTTCTCCGCCAAGACCCGCCATCGCACCACCCTCGTTCTGGTCACTCACGACCTTGCCCTTGCCAGGAAATGCGACCGCG
TCGTGCGCGTGCGTTCCGGCGAGATCGACCATCACAGCCTGGCTCTGCGCGAGGACGCGCCCGCATGA

Protein sequence : 
MTNGPAIALKGVHLSLGEGAGRVHILKGIDLEIDAGTSVGLVGPSGSGKSTLLMVMAGLERADAGTVRVAGTELGPLSED
DLARFRGRNVGIVFQSFHLVPNMTALENVAVPLELAGDRAAFDKARAELDAVGLGHRMHHYPAQMSGGEQQRVAVARALV
VEPAILIADEPTGNLDDATGDQIVELMFSAKTRHRTTLVLVTHDLALARKCDRVVRVRSGEIDHHSLALREDAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-24 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-28 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SL003B_0442 YP_004302173.1 ABC transporter ATPase NC_008702.1.4606598. Protein 5e-29 46
SL003B_0442 YP_004302173.1 ABC transporter ATPase NC_012469.1.7686878. Protein 4e-30 42